Workflow Provenance Data

Workflow overall summary

Taverna Workflow Instance ID	FlowID:Taverna:Workflow:org.embl.ebi.escience.scufl.ScuflModel@13ffa48:user:rs2@mygrid.org.uk::1055511220906
Status	COMPLETE
User	user:MIR3TestSet1

Invoked Services Details

SERVICE

http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl

Port

SrsEbiQuery

Operation

queryHgvbaseByEmblAccNumber

Status

COMPLETE

Start Time

End Time

Name	Type	Value
INPUT DATA SET
emblAccNumber	org.w3c.dom.Element	<getAccessionNumberReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">embl-AccNumber:J04444</getAccessionNumberReturn>
OUTPUT DATA SET
Name	Type	Value
queryHgvbaseByEmblAccNumberReturn	org.w3c.dom.Element	<queryHgvbaseByEmblAccNumberReturn soapenc:arrayType="xsd:string[1]" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="soapenc:Array"> <item>HGBASE:SNP000571403</item> </queryHgvbaseByEmblAccNumberReturn>

SERVICE

http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl

Port

SrsEbiQuery

Operation

queryById

Status

COMPLETE

Start Time

End Time

Name	Type	Value
INPUT DATA SET
usa	org.w3c.dom.Element	<getAccessionNumberReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">embl-AccNumber:J04444</getAccessionNumberReturn>
OUTPUT DATA SET
Name	Type	Value
queryByIdReturn	org.w3c.dom.Element	<queryByIdReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">ID HSCYC1A standard; DNA; HUM; 4622 BP. XX AC J04444; XX SV J04444.1 XX DT 22-APR-1989 (Rel. 19, Created) DT 02-JUL-1999 (Rel. 60, Last updated, Version 4) XX DE Human cytochrome c-1 gene, complete cds. XX KW cytochrome; cytochrome c-1. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Primates; Catarrhini; Hominidae; Homo. XX RN [1] RP 1-4622 RX MEDLINE; 89109139. RA Suzuki H., Hosokawa Y., Nishikimi M., Ozawa T.; RT "Structural organization of the human mitochondrial cytochrome c1 gene"; RL J. Biol. Chem. 264(3):1368-1374(1989). XX DR ENSEMBL1; ENSG00000179091; ENST00000318911. DR GDB; 119827; CYC1. DR GOA; P08574; P08574. DR SWISS-PROT; P08574; CY1_HUMAN. XX CC Draft entry and computer-readable sequence [1] kindly submitted by CC T.Ozawa, 28-OCT-1988. XX FH Key Location/Qualifiers FH FT source 1..4622 FT /db_xref="taxon:9606" FT /organism="Homo sapiens" FT /map="8q24" FT prim_transcript <1..3801 FT /note="cytochrome c-1 mRNA and introns" FT gene 1407..1535 FT /gene="CYC1" FT exon <1407..1535 FT /note="cytochrome c-1; G00-119-827" FT /number=1 FT /gene="CYC1" FT CDS join(1407..1535,2138..2334,2429..2555,2641..2798, FT 2888..3048,3311..3411,3508..3612) FT /codon_start=1 FT /db_xref="GOA:P08574" FT /db_xref="SWISS-PROT:P08574" FT /note="cytochrome c-1" FT /protein_id="AAA52135.1" FT /translation="MAAAAASLRGVVLGPRGAGLPGARARGLLCSARPGQLPLRTPQAV FT ALSSKSGLSRGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSS FT LDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGE FT MFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPP FT TGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPE FT HDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRPPK" FT intron 1536..2137 FT /note="cytochrome c-1, intron A" FT exon 2138..2334 FT /number=2 FT intron 2335..2428 FT /note="cytochrome c-1, intron B" FT exon 2429..2555 FT /number=3 FT intron 2556..2640 FT /note="cytochrome c-1, intron C" FT exon 2641..2798 FT /number=4 FT intron 2799..2887 FT /note="cytochrome c-1, intron D" FT exon 2888..3048 FT /number=5 FT intron 3049..3310 FT /note="cytochrome c-1, intron E" FT exon 3311..3411 FT /number=6 FT intron 3412..3507 FT /note="cytochrome c-1, intron F" FT exon 3508..>3612 FT /note="cytochrome c-1" FT /number=7 XX SQ Sequence 4622 BP; 862 A; 1309 C; 1483 G; 968 T; 0 other; gtcgactttt agtttagatt gtgccatctg gctctagcca atggagacag gacacagtag 60 cagggacaag ctgtgtaagg gataaaaata gcttctctcc tttattcagg tgtgctctca 120 ccatttttcc atctgtgagg agcaccctct ctgcagaaag taaaattgac ttgctgagag 180 aactttttgt cggaatgctg atctttcctt atggtaccag ggaacaagcg ttctgtttct 240 aaataaacat tttacatata acacagggtt tctccatgtt ggtcaggctg gtctcaaact 300 cacgacctca agtgatctgg ggcctcccaa agtgctggga ttacaggcgt gagcaccgca 360 cccagcctag tttttaaatt ttatttgctt tttttttttt cttgagaggg agtcttccgt 420 ctgtcatcca ggctggagtg cagtggcacg atctctactc actgcaacct ccgcctcccg 480 ggttcaagcg attctcctgc ctcagcctcc ccagagtagc tgggactaca ggcgcgcgcc 540 accacgcctg gctaattttt gtattttcag tagagacaag gtttcaccat gctgaccagg 600 atggtctcca tcttttgacc tcgtgatctg cccgccccac cctcccaaag tgctgggatt 660 acagcgtgag ccaccgcgcc cggcctttgc ttacttttta aatattttaa aataaaaata 720 ttctcacata acaagatcat atttacttac ttttttgaga cgaggtctcg ctcgatatcg 780 cccaggctgg agtgcagtgg cgatctcggc tcaccgcagt ctccacctcc ggggctcaag 840 cgatcctgcc tcagcttccc aaagcgctag gacccaaggc gcgcatcacg cgtcgggcca 900 tgagtcaagg gaatgaagga gaacagggtg ctcagcctgg gggcccagcc tcccgctggt 960 gcacgcgctg cctgcggccg agacccctgc ccgcaccctc tgccgggctg ccctccaagc 1020 cgccctttct ctggaggtcc tcagcctgca ggggcaccct ccacccggcc atcgcgcagc 1080 ctgggaaggt ggagaaaagg acgtcggggt gtcggaggcg gcgtgggaaa cgccgggcgg 1140 agcgtggcgc tgtcacggca acagagagac gcgacggggc cccgccccac cgccagtttc 1200 cacgacaacc cgaagagcgt ggggagtcag gcggtgcccc ggcccctgac tgacgcgacc 1260 ggggccagcg cgcttcgtcc ccgcccaccc gacaggcccc gcccccgagc ccggccccgc 1320 cccgcgctcc ccggctttcg cgaggttttg actctcgtgg cgccccaggg gccgacggga 1380 gtggcggccg cgcggaggag gccaagatgg cggcagctgc ggcttcgctt cgcggggtag 1440 tgttgggccc gcggggcgcg gggctcccgg gcgcgcgtgc ccggggtctg ctgtgcagcg 1500 cgcggcccgg gcagctcccg ctacggacac ctcaggtgag cgctgggccg ggccccggcc 1560 tccgcgcggc cccgcatctc cgtgaaggtc acggcgggga ggctgcgggc gcgggcctgg 1620 gcagcgcgga agcggtaccg gccacccagc gtccccggtc ccagctgcct gccgaccttg 1680 agctggtggg atcagggctg ggcgcccacc tctccgaacg gcagagagcc cgtccccagc 1740 gtgggggttg gcgggacggg ctagctgccg tggcggggct ggggctttcc cgaatggcgc 1800 gcccaggacg gctcttgcgg ctggctgtcc aaactgggcc cgcgtcctga agtgacccca 1860 gcctgatctc gccagtgctt gtgaccttgg cctgtcccag cacccttggt cacttcggtc 1920 tgatccccgg ctcaggatcc aggaacaccc tctcctgaga gcgaatcacg gtctaggggt 1980 cagcggcgga gagggatggg gtgggtagtg ggacagggtg tgcgtctggt gccctgcagg 2040 aggaggccat tgctgggtgg agaggtgggc gctgagagtc agatccccag gtagggctgg 2100 gtggtgtcct ggcaagcgct gagcggagat cttgcaggca gtggccttgt cgtcgaagtc 2160 tggcctttcc cgaggccgga aagtgatgct gtcagcgctg ggcatgctgg cggcaggggg 2220 tgcggggctg gccgtggctc tgcattcggc tgtgagtgcc agtgacctgg agctgcaccc 2280 ccccagctat ccgtggtctc accgtggcct cctctcttcc ttggaccaca ccaggtgtgc 2340 agctggctgg ctggctggca gcgggaggtt ctgggtggag ctggtaaggt ggaatcttca 2400 gctttcctaa ccctttccct ccctccagca tccggagggg tttccaggta tataagcagg 2460 tgtgcgcctc ctgccacagc atggacttcg tggcctaccg ccacctggtg ggcgtgtgct 2520 acacggagga tgaagctaag gagctggctg cggaggtgtg gggtctggga tgcctgggac 2580 ccagggctca gggctcccac tgttgagatg gcagggttgt gatgaggctc tcggtggcag 2640 gtggaggttc aagacggccc caatgaagat ggggagatgt tcatgcggcc agggaagctg 2700 ttcgactatt tcccaaaacc ataccccaac agtgaggctg ctcgagctgc caacaacgga 2760 gcattgcccc ctgacctcag ctacatcgtg cgagctaggt acacgggctg cccatggggt 2820 ggtgctggag agatggggga agggctgact tgtgcttgga actaaggagc catggatctg 2880 gtcctaggca tggtggtgag gactacgtct tctccctgct cacgggctac tgcgagccac 2940 ccaccggggt gtcactgcgg gaaggtctct acttcaaccc ctactttcct ggccaggcca 3000 ttgccatggc ccctcccatc tacacagatg tcttagagtt tgacgatggt aagaggcctc 3060 cagtctccta cccccaggga tgctttccct gtgttcctgg gtccaggagg tcctgcccac 3120 ttcttgtctg gggcgtcttc tgtgcatgtc tcaggaggct tttgggctcc ttcagttttg 3180 cgtatgtccg gtggagggta ctgccccttt gatgccttgg gtaggggcag tgtctgcttc 3240 acagaggggg ggcatgatcc caggttggac atgagcctga gaatagccct cactgcttgt 3300 cgttggccag gcaccccagc taccatgtcc cagatagcca aggatgtgtg caccttcctg 3360 cgctgggcat ctgagccaga gcacgaccat cgaaaacgca tggggctcaa ggtaaaaggg 3420 ttgggaggcc atggtgggta tcagagaagg gctgggagct gggcagggct cctcccactc 3480 ccttctctga gccttccttg tctgcagatg ttgatgatga tggctctgct ggtgcccctg 3540 gtctacacca taaagcggca caagtggtca gtcctgaaga gtcggaagct ggcatatcgg 3600 ccgcccaagt gaccctgtcc agtgtctgct tgccatcctg ccagaacagg ccctcaagcc 3660 caagagccat cccaggcctg ttcaggcctc agctaagcct ctcttcatct ggaagaagag 3720 gcaagggggc aggagaccag gctctagctc tgggccctcc ttcagccccc atcatgggaa 3780 taaattaatt ttctcaatgt acatatttga gttattatat ggagtgcagg tttgcaagga 3840 actctgatac caagaccctt gccttcacaa ggctcccagg atgtcccatg tcccatgcag 3900 tgtggccagc aatgccctgc actgactggt agctgggaag tccagacagt gggtgtggga 3960 cagaaagcgg agaactgcat gttagaggaa gtcagcattt ggtggggtgg ggtgtgtctg 4020 agcacagagc tgaaaagggc ctagccaggc aggatgtggc ccagggacct gttggaatga 4080 acagccaagt gttaaggtgt tgaaccactt ggcccccatt ctgatggcag ggaaccttgc 4140 tcattttaac agggaaagcc tgtctagggc aggggctatt tattctgggt tcgggctgag 4200 gaaggggatg gctcccagcc aggtgaagga gtcaagtaga cagacaggat gtgtgtcatg 4260 gagtgaggag tggcccctcc tagcagtcca cagggtagct aggtggtggg tcctggccag 4320 aagctggagt agctgggttc ccacaggagc atgctgctga gggagggaga cagtggatgc 4380 tatctaggag ggtcacagag acatgaccca gcaccggccc agtgacctgg tgcaggactc 4440 actcctgagc ttccctcgtc cctaggaagg gaaggaaaac acccattttc attgctggtg 4500 tcctagctgc aggagctgag gggagtggtg gccatagtcc aaggaaggca agagctgaat 4560 gggagaaagg tggtaccaat aggcctgcag gcaaagagag gtgcaggcct gggggaccag 4620 gg 4622 // </queryByIdReturn>

SERVICE

http://mygrid.ncl.ac.uk/axis/services/EmblSnpEdit?wsdl

Port

SnpFeatureEmblEditor

Operation

mergeSnpData

Status

COMPLETE

Start Time

End Time

Name	Type	Value
INPUT DATA SET
emblEntry	org.w3c.dom.Element	<queryByIdReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">ID HSCYC1A standard; DNA; HUM; 4622 BP. XX AC J04444; XX SV J04444.1 XX DT 22-APR-1989 (Rel. 19, Created) DT 02-JUL-1999 (Rel. 60, Last updated, Version 4) XX DE Human cytochrome c-1 gene, complete cds. XX KW cytochrome; cytochrome c-1. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Primates; Catarrhini; Hominidae; Homo. XX RN [1] RP 1-4622 RX MEDLINE; 89109139. RA Suzuki H., Hosokawa Y., Nishikimi M., Ozawa T.; RT "Structural organization of the human mitochondrial cytochrome c1 gene"; RL J. Biol. Chem. 264(3):1368-1374(1989). XX DR ENSEMBL1; ENSG00000179091; ENST00000318911. DR GDB; 119827; CYC1. DR GOA; P08574; P08574. DR SWISS-PROT; P08574; CY1_HUMAN. XX CC Draft entry and computer-readable sequence [1] kindly submitted by CC T.Ozawa, 28-OCT-1988. XX FH Key Location/Qualifiers FH FT source 1..4622 FT /db_xref="taxon:9606" FT /organism="Homo sapiens" FT /map="8q24" FT prim_transcript <1..3801 FT /note="cytochrome c-1 mRNA and introns" FT gene 1407..1535 FT /gene="CYC1" FT exon <1407..1535 FT /note="cytochrome c-1; G00-119-827" FT /number=1 FT /gene="CYC1" FT CDS join(1407..1535,2138..2334,2429..2555,2641..2798, FT 2888..3048,3311..3411,3508..3612) FT /codon_start=1 FT /db_xref="GOA:P08574" FT /db_xref="SWISS-PROT:P08574" FT /note="cytochrome c-1" FT /protein_id="AAA52135.1" FT /translation="MAAAAASLRGVVLGPRGAGLPGARARGLLCSARPGQLPLRTPQAV FT ALSSKSGLSRGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSS FT LDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGE FT MFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPP FT TGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPE FT HDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRPPK" FT intron 1536..2137 FT /note="cytochrome c-1, intron A" FT exon 2138..2334 FT /number=2 FT intron 2335..2428 FT /note="cytochrome c-1, intron B" FT exon 2429..2555 FT /number=3 FT intron 2556..2640 FT /note="cytochrome c-1, intron C" FT exon 2641..2798 FT /number=4 FT intron 2799..2887 FT /note="cytochrome c-1, intron D" FT exon 2888..3048 FT /number=5 FT intron 3049..3310 FT /note="cytochrome c-1, intron E" FT exon 3311..3411 FT /number=6 FT intron 3412..3507 FT /note="cytochrome c-1, intron F" FT exon 3508..>3612 FT /note="cytochrome c-1" FT /number=7 XX SQ Sequence 4622 BP; 862 A; 1309 C; 1483 G; 968 T; 0 other; gtcgactttt agtttagatt gtgccatctg gctctagcca atggagacag gacacagtag 60 cagggacaag ctgtgtaagg gataaaaata gcttctctcc tttattcagg tgtgctctca 120 ccatttttcc atctgtgagg agcaccctct ctgcagaaag taaaattgac ttgctgagag 180 aactttttgt cggaatgctg atctttcctt atggtaccag ggaacaagcg ttctgtttct 240 aaataaacat tttacatata acacagggtt tctccatgtt ggtcaggctg gtctcaaact 300 cacgacctca agtgatctgg ggcctcccaa agtgctggga ttacaggcgt gagcaccgca 360 cccagcctag tttttaaatt ttatttgctt tttttttttt cttgagaggg agtcttccgt 420 ctgtcatcca ggctggagtg cagtggcacg atctctactc actgcaacct ccgcctcccg 480 ggttcaagcg attctcctgc ctcagcctcc ccagagtagc tgggactaca ggcgcgcgcc 540 accacgcctg gctaattttt gtattttcag tagagacaag gtttcaccat gctgaccagg 600 atggtctcca tcttttgacc tcgtgatctg cccgccccac cctcccaaag tgctgggatt 660 acagcgtgag ccaccgcgcc cggcctttgc ttacttttta aatattttaa aataaaaata 720 ttctcacata acaagatcat atttacttac ttttttgaga cgaggtctcg ctcgatatcg 780 cccaggctgg agtgcagtgg cgatctcggc tcaccgcagt ctccacctcc ggggctcaag 840 cgatcctgcc tcagcttccc aaagcgctag gacccaaggc gcgcatcacg cgtcgggcca 900 tgagtcaagg gaatgaagga gaacagggtg ctcagcctgg gggcccagcc tcccgctggt 960 gcacgcgctg cctgcggccg agacccctgc ccgcaccctc tgccgggctg ccctccaagc 1020 cgccctttct ctggaggtcc tcagcctgca ggggcaccct ccacccggcc atcgcgcagc 1080 ctgggaaggt ggagaaaagg acgtcggggt gtcggaggcg gcgtgggaaa cgccgggcgg 1140 agcgtggcgc tgtcacggca acagagagac gcgacggggc cccgccccac cgccagtttc 1200 cacgacaacc cgaagagcgt ggggagtcag gcggtgcccc ggcccctgac tgacgcgacc 1260 ggggccagcg cgcttcgtcc ccgcccaccc gacaggcccc gcccccgagc ccggccccgc 1320 cccgcgctcc ccggctttcg cgaggttttg actctcgtgg cgccccaggg gccgacggga 1380 gtggcggccg cgcggaggag gccaagatgg cggcagctgc ggcttcgctt cgcggggtag 1440 tgttgggccc gcggggcgcg gggctcccgg gcgcgcgtgc ccggggtctg ctgtgcagcg 1500 cgcggcccgg gcagctcccg ctacggacac ctcaggtgag cgctgggccg ggccccggcc 1560 tccgcgcggc cccgcatctc cgtgaaggtc acggcgggga ggctgcgggc gcgggcctgg 1620 gcagcgcgga agcggtaccg gccacccagc gtccccggtc ccagctgcct gccgaccttg 1680 agctggtggg atcagggctg ggcgcccacc tctccgaacg gcagagagcc cgtccccagc 1740 gtgggggttg gcgggacggg ctagctgccg tggcggggct ggggctttcc cgaatggcgc 1800 gcccaggacg gctcttgcgg ctggctgtcc aaactgggcc cgcgtcctga agtgacccca 1860 gcctgatctc gccagtgctt gtgaccttgg cctgtcccag cacccttggt cacttcggtc 1920 tgatccccgg ctcaggatcc aggaacaccc tctcctgaga gcgaatcacg gtctaggggt 1980 cagcggcgga gagggatggg gtgggtagtg ggacagggtg tgcgtctggt gccctgcagg 2040 aggaggccat tgctgggtgg agaggtgggc gctgagagtc agatccccag gtagggctgg 2100 gtggtgtcct ggcaagcgct gagcggagat cttgcaggca gtggccttgt cgtcgaagtc 2160 tggcctttcc cgaggccgga aagtgatgct gtcagcgctg ggcatgctgg cggcaggggg 2220 tgcggggctg gccgtggctc tgcattcggc tgtgagtgcc agtgacctgg agctgcaccc 2280 ccccagctat ccgtggtctc accgtggcct cctctcttcc ttggaccaca ccaggtgtgc 2340 agctggctgg ctggctggca gcgggaggtt ctgggtggag ctggtaaggt ggaatcttca 2400 gctttcctaa ccctttccct ccctccagca tccggagggg tttccaggta tataagcagg 2460 tgtgcgcctc ctgccacagc atggacttcg tggcctaccg ccacctggtg ggcgtgtgct 2520 acacggagga tgaagctaag gagctggctg cggaggtgtg gggtctggga tgcctgggac 2580 ccagggctca gggctcccac tgttgagatg gcagggttgt gatgaggctc tcggtggcag 2640 gtggaggttc aagacggccc caatgaagat ggggagatgt tcatgcggcc agggaagctg 2700 ttcgactatt tcccaaaacc ataccccaac agtgaggctg ctcgagctgc caacaacgga 2760 gcattgcccc ctgacctcag ctacatcgtg cgagctaggt acacgggctg cccatggggt 2820 ggtgctggag agatggggga agggctgact tgtgcttgga actaaggagc catggatctg 2880 gtcctaggca tggtggtgag gactacgtct tctccctgct cacgggctac tgcgagccac 2940 ccaccggggt gtcactgcgg gaaggtctct acttcaaccc ctactttcct ggccaggcca 3000 ttgccatggc ccctcccatc tacacagatg tcttagagtt tgacgatggt aagaggcctc 3060 cagtctccta cccccaggga tgctttccct gtgttcctgg gtccaggagg tcctgcccac 3120 ttcttgtctg gggcgtcttc tgtgcatgtc tcaggaggct tttgggctcc ttcagttttg 3180 cgtatgtccg gtggagggta ctgccccttt gatgccttgg gtaggggcag tgtctgcttc 3240 acagaggggg ggcatgatcc caggttggac atgagcctga gaatagccct cactgcttgt 3300 cgttggccag gcaccccagc taccatgtcc cagatagcca aggatgtgtg caccttcctg 3360 cgctgggcat ctgagccaga gcacgaccat cgaaaacgca tggggctcaa ggtaaaaggg 3420 ttgggaggcc atggtgggta tcagagaagg gctgggagct gggcagggct cctcccactc 3480 ccttctctga gccttccttg tctgcagatg ttgatgatga tggctctgct ggtgcccctg 3540 gtctacacca taaagcggca caagtggtca gtcctgaaga gtcggaagct ggcatatcgg 3600 ccgcccaagt gaccctgtcc agtgtctgct tgccatcctg ccagaacagg ccctcaagcc 3660 caagagccat cccaggcctg ttcaggcctc agctaagcct ctcttcatct ggaagaagag 3720 gcaagggggc aggagaccag gctctagctc tgggccctcc ttcagccccc atcatgggaa 3780 taaattaatt ttctcaatgt acatatttga gttattatat ggagtgcagg tttgcaagga 3840 actctgatac caagaccctt gccttcacaa ggctcccagg atgtcccatg tcccatgcag 3900 tgtggccagc aatgccctgc actgactggt agctgggaag tccagacagt gggtgtggga 3960 cagaaagcgg agaactgcat gttagaggaa gtcagcattt ggtggggtgg ggtgtgtctg 4020 agcacagagc tgaaaagggc ctagccaggc aggatgtggc ccagggacct gttggaatga 4080 acagccaagt gttaaggtgt tgaaccactt ggcccccatt ctgatggcag ggaaccttgc 4140 tcattttaac agggaaagcc tgtctagggc aggggctatt tattctgggt tcgggctgag 4200 gaaggggatg gctcccagcc aggtgaagga gtcaagtaga cagacaggat gtgtgtcatg 4260 gagtgaggag tggcccctcc tagcagtcca cagggtagct aggtggtggg tcctggccag 4320 aagctggagt agctgggttc ccacaggagc atgctgctga gggagggaga cagtggatgc 4380 tatctaggag ggtcacagag acatgaccca gcaccggccc agtgacctgg tgcaggactc 4440 actcctgagc ttccctcgtc cctaggaagg gaaggaaaac acccattttc attgctggtg 4500 tcctagctgc aggagctgag gggagtggtg gccatagtcc aaggaaggca agagctgaat 4560 gggagaaagg tggtaccaat aggcctgcag gcaaagagag gtgcaggcct gggggaccag 4620 gg 4622 // </queryByIdReturn>
hgvbaseEntries	org.w3c.dom.Element	<queryByArrayIdsReturn soapenc:arrayType="xsd:string[1]" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="soapenc:Array"> <item>ID SNP000571403 VarType SNP VarStatus suspected CurationStatus --- DNARefMolecule EMBL::J04444.1:3284 UpStreamSeq CCCAGGTTGGACATGAGCCTGAGAA Allele C Allele T DnStreamSeq AGCCCTCACTGCTTGTCGTTGGCCA XX GeneID GID000001807 GeneSymbol CYC1 GeneName Cytochrome c-1 GeneType Functional Gene GeneRegion Int: Splc? Feature DNA Feature /seq:c Feature DNA Feature /seq:t XX DbXRef EMBL::J04444.1 DbXRef IMS-JST::IMS-JST005639 XX SourceID SRC000000867 Citation IMS-JST Record Submitter Yusuke Nakamura (SUB000000032) SourceComment Submitted data (21-05-2001) // </item> </queryByArrayIdsReturn>
OUTPUT DATA SET
Name	Type	Value
mergeSnpDataReturn	org.w3c.dom.Element	<mergeSnpDataReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">ID HSCYC1A standard; DNA; HUM; 4622 BP. XX AC J04444; XX SV J04444.1 XX DT 22-APR-1989 (Rel. 19, Created) DT 02-JUL-1999 (Rel. 60, Last updated, Version 4) XX DE Human cytochrome c-1 gene, complete cds. XX KW cytochrome; cytochrome c-1. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Primates; Catarrhini; Hominidae; Homo. XX CC Draft entry and computer-readable sequence [1] kindly submitted by CC T.Ozawa, 28-OCT-1988. XX FH Key Location/Qualifiers FT source 1..4622 FT /db_xref="taxon:9606" FT /map="8q24" FT /organism="Homo sapiens" FT prim_transcript <1..3801 FT /note="cytochrome c-1 mRNA and introns" FT gene 1407..1535 FT /gene="CYC1" FT CDS join(1407..1535,2138..2334,2429..2555,2641..2798, FT 2888..3048,3311..3411,3508..3612) FT /codon_start=1 FT /db_xref="GOA:P08574" FT /db_xref="SWISS-PROT:P08574" FT /note="cytochrome c-1" FT /protein_id="AAA52135.1" FT /translation="MAAAAASLRGVVLGPRGAGLPGARARGLLCSARPGQLPLRTPQAV FT ALSSKSGLSRGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSS FT LDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGE FT MFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPP FT TGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPE FT HDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRPPK" FT exon <1407..1535 FT /gene="CYC1" FT /note="cytochrome c-1; G00-119-827" FT /number=1 FT intron 1536..2137 FT /note="cytochrome c-1, intron A" FT exon 2138..2334 FT /number=2 FT intron 2335..2428 FT /note="cytochrome c-1, intron B" FT exon 2429..2555 FT /number=3 FT intron 2556..2640 FT /note="cytochrome c-1, intron C" FT exon 2641..2798 FT /number=4 FT intron 2799..2887 FT /note="cytochrome c-1, intron D" FT exon 2888..3048 FT /number=5 FT intron 3049..3310 FT /note="cytochrome c-1, intron E" FT variation 3284 FT /db_xref="HGBASE:SNP000571403" FT /note="SNP" FT /replace="t" FT exon 3311..3411 FT /number=6 FT intron 3412..3507 FT /note="cytochrome c-1, intron F" FT exon 3508..>3612 FT /note="cytochrome c-1" FT /number=7 XX SQ Sequence 4622 BP; 862 A; 1309 C; 1483 G; 968 T; 0 other; gtcgactttt agtttagatt gtgccatctg gctctagcca atggagacag gacacagtag 60 cagggacaag ctgtgtaagg gataaaaata gcttctctcc tttattcagg tgtgctctca 120 ccatttttcc atctgtgagg agcaccctct ctgcagaaag taaaattgac ttgctgagag 180 aactttttgt cggaatgctg atctttcctt atggtaccag ggaacaagcg ttctgtttct 240 aaataaacat tttacatata acacagggtt tctccatgtt ggtcaggctg gtctcaaact 300 cacgacctca agtgatctgg ggcctcccaa agtgctggga ttacaggcgt gagcaccgca 360 cccagcctag tttttaaatt ttatttgctt tttttttttt cttgagaggg agtcttccgt 420 ctgtcatcca ggctggagtg cagtggcacg atctctactc actgcaacct ccgcctcccg 480 ggttcaagcg attctcctgc ctcagcctcc ccagagtagc tgggactaca ggcgcgcgcc 540 accacgcctg gctaattttt gtattttcag tagagacaag gtttcaccat gctgaccagg 600 atggtctcca tcttttgacc tcgtgatctg cccgccccac cctcccaaag tgctgggatt 660 acagcgtgag ccaccgcgcc cggcctttgc ttacttttta aatattttaa aataaaaata 720 ttctcacata acaagatcat atttacttac ttttttgaga cgaggtctcg ctcgatatcg 780 cccaggctgg agtgcagtgg cgatctcggc tcaccgcagt ctccacctcc ggggctcaag 840 cgatcctgcc tcagcttccc aaagcgctag gacccaaggc gcgcatcacg cgtcgggcca 900 tgagtcaagg gaatgaagga gaacagggtg ctcagcctgg gggcccagcc tcccgctggt 960 gcacgcgctg cctgcggccg agacccctgc ccgcaccctc tgccgggctg ccctccaagc 1020 cgccctttct ctggaggtcc tcagcctgca ggggcaccct ccacccggcc atcgcgcagc 1080 ctgggaaggt ggagaaaagg acgtcggggt gtcggaggcg gcgtgggaaa cgccgggcgg 1140 agcgtggcgc tgtcacggca acagagagac gcgacggggc cccgccccac cgccagtttc 1200 cacgacaacc cgaagagcgt ggggagtcag gcggtgcccc ggcccctgac tgacgcgacc 1260 ggggccagcg cgcttcgtcc ccgcccaccc gacaggcccc gcccccgagc ccggccccgc 1320 cccgcgctcc ccggctttcg cgaggttttg actctcgtgg cgccccaggg gccgacggga 1380 gtggcggccg cgcggaggag gccaagatgg cggcagctgc ggcttcgctt cgcggggtag 1440 tgttgggccc gcggggcgcg gggctcccgg gcgcgcgtgc ccggggtctg ctgtgcagcg 1500 cgcggcccgg gcagctcccg ctacggacac ctcaggtgag cgctgggccg ggccccggcc 1560 tccgcgcggc cccgcatctc cgtgaaggtc acggcgggga ggctgcgggc gcgggcctgg 1620 gcagcgcgga agcggtaccg gccacccagc gtccccggtc ccagctgcct gccgaccttg 1680 agctggtggg atcagggctg ggcgcccacc tctccgaacg gcagagagcc cgtccccagc 1740 gtgggggttg gcgggacggg ctagctgccg tggcggggct ggggctttcc cgaatggcgc 1800 gcccaggacg gctcttgcgg ctggctgtcc aaactgggcc cgcgtcctga agtgacccca 1860 gcctgatctc gccagtgctt gtgaccttgg cctgtcccag cacccttggt cacttcggtc 1920 tgatccccgg ctcaggatcc aggaacaccc tctcctgaga gcgaatcacg gtctaggggt 1980 cagcggcgga gagggatggg gtgggtagtg ggacagggtg tgcgtctggt gccctgcagg 2040 aggaggccat tgctgggtgg agaggtgggc gctgagagtc agatccccag gtagggctgg 2100 gtggtgtcct ggcaagcgct gagcggagat cttgcaggca gtggccttgt cgtcgaagtc 2160 tggcctttcc cgaggccgga aagtgatgct gtcagcgctg ggcatgctgg cggcaggggg 2220 tgcggggctg gccgtggctc tgcattcggc tgtgagtgcc agtgacctgg agctgcaccc 2280 ccccagctat ccgtggtctc accgtggcct cctctcttcc ttggaccaca ccaggtgtgc 2340 agctggctgg ctggctggca gcgggaggtt ctgggtggag ctggtaaggt ggaatcttca 2400 gctttcctaa ccctttccct ccctccagca tccggagggg tttccaggta tataagcagg 2460 tgtgcgcctc ctgccacagc atggacttcg tggcctaccg ccacctggtg ggcgtgtgct 2520 acacggagga tgaagctaag gagctggctg cggaggtgtg gggtctggga tgcctgggac 2580 ccagggctca gggctcccac tgttgagatg gcagggttgt gatgaggctc tcggtggcag 2640 gtggaggttc aagacggccc caatgaagat ggggagatgt tcatgcggcc agggaagctg 2700 ttcgactatt tcccaaaacc ataccccaac agtgaggctg ctcgagctgc caacaacgga 2760 gcattgcccc ctgacctcag ctacatcgtg cgagctaggt acacgggctg cccatggggt 2820 ggtgctggag agatggggga agggctgact tgtgcttgga actaaggagc catggatctg 2880 gtcctaggca tggtggtgag gactacgtct tctccctgct cacgggctac tgcgagccac 2940 ccaccggggt gtcactgcgg gaaggtctct acttcaaccc ctactttcct ggccaggcca 3000 ttgccatggc ccctcccatc tacacagatg tcttagagtt tgacgatggt aagaggcctc 3060 cagtctccta cccccaggga tgctttccct gtgttcctgg gtccaggagg tcctgcccac 3120 ttcttgtctg gggcgtcttc tgtgcatgtc tcaggaggct tttgggctcc ttcagttttg 3180 cgtatgtccg gtggagggta ctgccccttt gatgccttgg gtaggggcag tgtctgcttc 3240 acagaggggg ggcatgatcc caggttggac atgagcctga gaatagccct cactgcttgt 3300 cgttggccag gcaccccagc taccatgtcc cagatagcca aggatgtgtg caccttcctg 3360 cgctgggcat ctgagccaga gcacgaccat cgaaaacgca tggggctcaa ggtaaaaggg 3420 ttgggaggcc atggtgggta tcagagaagg gctgggagct gggcagggct cctcccactc 3480 ccttctctga gccttccttg tctgcagatg ttgatgatga tggctctgct ggtgcccctg 3540 gtctacacca taaagcggca caagtggtca gtcctgaaga gtcggaagct ggcatatcgg 3600 ccgcccaagt gaccctgtcc agtgtctgct tgccatcctg ccagaacagg ccctcaagcc 3660 caagagccat cccaggcctg ttcaggcctc agctaagcct ctcttcatct ggaagaagag 3720 gcaagggggc aggagaccag gctctagctc tgggccctcc ttcagccccc atcatgggaa 3780 taaattaatt ttctcaatgt acatatttga gttattatat ggagtgcagg tttgcaagga 3840 actctgatac caagaccctt gccttcacaa ggctcccagg atgtcccatg tcccatgcag 3900 tgtggccagc aatgccctgc actgactggt agctgggaag tccagacagt gggtgtggga 3960 cagaaagcgg agaactgcat gttagaggaa gtcagcattt ggtggggtgg ggtgtgtctg 4020 agcacagagc tgaaaagggc ctagccaggc aggatgtggc ccagggacct gttggaatga 4080 acagccaagt gttaaggtgt tgaaccactt ggcccccatt ctgatggcag ggaaccttgc 4140 tcattttaac agggaaagcc tgtctagggc aggggctatt tattctgggt tcgggctgag 4200 gaaggggatg gctcccagcc aggtgaagga gtcaagtaga cagacaggat gtgtgtcatg 4260 gagtgaggag tggcccctcc tagcagtcca cagggtagct aggtggtggg tcctggccag 4320 aagctggagt agctgggttc ccacaggagc atgctgctga gggagggaga cagtggatgc 4380 tatctaggag ggtcacagag acatgaccca gcaccggccc agtgacctgg tgcaggactc 4440 actcctgagc ttccctcgtc cctaggaagg gaaggaaaac acccattttc attgctggtg 4500 tcctagctgc aggagctgag gggagtggtg gccatagtcc aaggaaggca agagctgaat 4560 gggagaaagg tggtaccaat aggcctgcag gcaaagagag gtgcaggcct gggggaccag 4620 gg 4622 // </mergeSnpDataReturn>

SERVICE

http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl

Port

SrsEbiQuery

Operation

queryByArrayIds

Status

COMPLETE

Start Time

End Time

Name	Type	Value
INPUT DATA SET
usas	org.w3c.dom.Element	<queryHgvbaseByEmblAccNumberReturn soapenc:arrayType="xsd:string[1]" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="soapenc:Array"> <item>HGBASE:SNP000571403</item> </queryHgvbaseByEmblAccNumberReturn>
OUTPUT DATA SET
Name	Type	Value
queryByArrayIdsReturn	org.w3c.dom.Element	<queryByArrayIdsReturn soapenc:arrayType="xsd:string[1]" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="soapenc:Array"> <item>ID SNP000571403 VarType SNP VarStatus suspected CurationStatus --- DNARefMolecule EMBL::J04444.1:3284 UpStreamSeq CCCAGGTTGGACATGAGCCTGAGAA Allele C Allele T DnStreamSeq AGCCCTCACTGCTTGTCGTTGGCCA XX GeneID GID000001807 GeneSymbol CYC1 GeneName Cytochrome c-1 GeneType Functional Gene GeneRegion Int: Splc? Feature DNA Feature /seq:c Feature DNA Feature /seq:t XX DbXRef EMBL::J04444.1 DbXRef IMS-JST::IMS-JST005639 XX SourceID SRC000000867 Citation IMS-JST Record Submitter Yusuke Nakamura (SUB000000032) SourceComment Submitted data (21-05-2001) // </item> </queryByArrayIdsReturn>

SERVICE

http://mygrid.ncl.ac.uk/axis/services/affymapper?wsdl

Port

AffymetrixMapper

Operation

getAccessionNumber

Status

COMPLETE

Start Time

End Time

Name	Type	Value
INPUT DATA SET
probeSetId	string	<probeSetId xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">1160_at</probeSetId>
OUTPUT DATA SET
Name	Type	Value
getAccessionNumberReturn	org.w3c.dom.Element	<getAccessionNumberReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">embl-AccNumber:J04444</getAccessionNumberReturn>
getAccessionNumberReturn	org.w3c.dom.Element	<getAccessionNumberReturn xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="xsd:string">embl-AccNumber:J04444</getAccessionNumberReturn>

Invoked Services Summary

Status	WSDL	PortType	Operation
COMPLETE	http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl	SrsEbiQuery	queryHgvbaseByEmblAccNumber
COMPLETE	http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl	SrsEbiQuery	queryById
COMPLETE	http://mygrid.ncl.ac.uk/axis/services/EmblSnpEdit?wsdl	SnpFeatureEmblEditor	mergeSnpData
COMPLETE	http://mygrid.ncl.ac.uk/axis/services/SrsEbiQuery?wsdl	SrsEbiQuery	queryByArrayIds
COMPLETE	http://mygrid.ncl.ac.uk/axis/services/affymapper?wsdl	AffymetrixMapper	getAccessionNumber

Provenance stylesheet provenance - 13 June 2003 - ^myGrid post Integration Fest Nottingham