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Document Store PresentationStore: Presentations PapersStore: Papers VideoStore: Video Demos MinutesStore: Minutes of meetings PlansStore: ...
Biological web services This document lists the appropriate links of all known biological web services. Its purpose is to provide a registry of all bio services that ...
myGrid Images Use the mygrid logo recreated.pdf and scale to your needs. The other attachments are part of the original artwork, currently only used as a tinted background ...
Resources on provenance A roadmap to useful resources on process and data provenance this is a bit dated and contents are being moved to this page. I am also planning ...
ProvenanceAndData See Resources on provenance The NESC Provenance in databases workshop, 21/5/2008 The workshop has been focused mainly on the theoretical underpinnings ...
Phase 1 Documents These initial phase documents are first drafts looking at how the use of provenance has a direct impact on the provenance model. These documents ...
SouthamptonLogo Extracted from the "Brand guideline". southampton.pdf: University of Southampton sec.pdf: School of Electronics and Computer Science ...
Poster Store Tips Adjust for your audience. Don't push sequence alignment algorithms to astrophysics people, and do show off cool enactor stuff to computer science ...
Making an OS X release of Taverna Assume we already have the generic taverna 1.5 release ready and want to make a fancy Mac version. This is the advantages of the ...
Where is my Taverna home directory? Given version 1.7.1 (replace where appropriate): (Note: For versions earlier than 1.5.2, the Taverna home directory was just ...
How do I use the Execute cmd line app tool? Note that generally we discourage the use of local tools in this way as your workflow will be highly specialised for your ...
How do I run a Perl script / command line from Taverna? You can use the Execute cmd line app processor (Local Services Local Java Widgets io Execute cmd line ...
Eclipse settings Taverna project properties Right click on the Taverna project, select properties (normally at the bottom of the list). Pick "Java Build Path". Select ...
Current Development Status We are currently developing what will be the second version of myGrid to be made available outside the project. myGrid is an open source ...
Provenance meeting with Norman on 05/03/2008 Minutes T1 model lack of a formal description OPM model import / export How do our ...
myGrid Publications See the public web site http://www.mygrid.org.uk and Publications link on Twiki AllHands2003 for papers presented there IJCIS ( http ...
Why are the results so deeply nested say when using BioMoby? This is related to the explanation for empty lists. Service that take a single value in and return a list ...
Why are there empty lists in my results? (e.g. when using Biomoby) An empty list usually means that for a given input, no results were found. For instance, if you ...
Taverna/myGrid FAQ When to use Taverna I am working in XXX research area what have people done in previous workflows in this area? Is Taverna right for me? When ...
How can I get Taverna to execute tasks in parallel? Taverna will run tasks in parallel whenever it's possible. In fact you have to put effort into serialising execution ...
I think I've found a bug what do I do? Post information on your bug to taverna users@lists.sourceforge.net. Subscribe: https://lists.sourceforge.net/lists/listinfo ...
How do I specify the HTTP proxy for Taverna? You can specify using a HTTP proxy by modifying your mygrid.properties used to start Taverna and uncommenting and completing ...
What is the latest version of Freefluo? Freefluo is the workflow engine used by the current version of Taverna. It was developed as part of the original myGrid project ...
How can I create my own processor to add to a workflow? There are several ways to achieve this. The main questions are what you have already and what you want to do ...
How can I make my web services searchable by Feta Your services need to be annotated and added to our service repository. There are currently no tools for users to ...
How can I annotate my web services for Taverna? Currently there are no tools available for users to annotate their own services. However, if you have your services ...
How do I use xpath to extract information from XML? XPath is a way to express a path to elements and parts of an XML document. Taverna provides a processor for this ...
Is there an easier way than adding StringConstants for simple input values such as database names? If the string constant is just going to a single parameter on a ...
How can I do looping in a workflow? Taverna does not support looping in the sense that there are no cycles within a workflow graph. Taverna in its present form supports ...
How do I use my database from Taverna? Processors within a Taverna workflow can be viewed as functions that is to say you feed them a set of inputs, press 'go' and ...
How does myGrid use the semantic web? Which ontology? myGrid uses ontologies for semantic service discovery (the myGrid ontology) and for managing process provenance ...
How can I add a library to the classpath for use with Beanshell/APIConsumer Since version 1.5.1.5, this is achieved by putting the JAR files in the folder lib within ...
Taverna 2 (t2) FAQ What is Taverna 2? Taverna 2, alias t2, alias t2core, is a new development of the underlying framework for workflows. When is t2 to be released ...
Where is the Taverna service registry? The service registry that contains semantic annotations of services is currently maintained by the myGrid project team (actually ...
Does Taverna require an OMII grid to be installed? No. You don't have to install any other OMII UK software to use Taverna. It is a stand alone piece of software ...
When should I use Kepler instead of Taverna? Three big differences between Kepler and Taverna are (1) the user interface, (2) the models of computation and (3) the ...
Taverna Security what's the deal There is a perception that Taverna can't support security requirements. Security means many different things to many different ...
Provenance meeting with Norman 20/02/08 Minutes Open Provenance Model ( OPM ) Questions were raised about how Open it actually was and the ability to ...
Provenance meeting with Norman 18/01/08 Minutes Minutes are based on a mind map by Paolo Idea: maximise product value but having a convergence of mature research ...
Where can I see the actual SOAP messages being sent/received? (I'm debugging a service) If you are wanting to examine the messages sent from Taverna, then by default ...
RevisedT2DataManager (from a mail I tried to send to taverna hackers) : Hi guys, t2 data people especially! I was just drawing a diagram of our data reference architecture ...
Get Out There where should we be represented? The purpose of this page is to temporarily list conferences/events/publication opportunities that we are interest in ...
Presentations Powerpoint Template for myGrid presentations myGrid.pot Cleaned up by RichCawley to separate graphics and content. Download and store locally ...
Taverna 2 Links Page This page contains links out to various documents describing aspects of Taverna 2 (T2), a complete rewrite of the workflow enactor, metadata model ...
Where and what is mygrid.properties mygrid.properties is a configuration file for Taverna that includes the HTTP proxy configuration and a list of services that ...
How can I render SVG output (and other MIME types) from my workflow? You can add multiple mime types to a workflow output port (to be used by the output renderers ...
How do I load multiple inputs from a file? When you read in a file by clicking Load inputs from the Run workflow dialogue it will be loaded as one single input ...
I'm trying to build Taverna using Maven, but I get "Error transferring file" If you use a proxy for internet access you will need to set up the proxy for Maven. The ...
How can I suspend my workflow execution and resume it the next day? Although we have a "Pause" button on the execution screen of Taverna, it might not work as you ...
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| I | Attachment | Action | Size | Date | Who | Comment |
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 txt | ahm_soaplab.txt | manage | 2.5 K | 31 Jul 2003 - 11:37 | MartinSenger | Soaplab - a unified Sesame door to analysis tools |
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