r5 - 11 Mar 2006 - 16:57:29 - DanieleTuriYou are here: myGrid wiki > 
Bioinformatics Web > WebServices
Bioinformatics Web > WebServicesWeb Services
Below is a list of services currently deployed and their location| Name | Description | Machine | Location | WSDL |
|---|---|---|---|---|
| crossmatch | A sequence comparison application used by RepeatMasker? | phoebus | /disk2/crossmatch/cross_match | |
| crossmatch (many reads) | phoebus | /disk2/crossmatch/cross_match.manyreads | ||
| cluster | phoebus | /disk2/crossmatch/cluster | ||
| loco | phoebus | /disk2/crossmatch/loco | ||
| swat | phoebus | /disk2/crossmatch/swat | ||
| genscan | Gene prediction application | phoebus | /disk2/genescan/genscan | |
| ace2Fasta | phoebus | /disk2/genome/bin/ace2Fasta.perl | ||
| ace2Oligos | phoebus | /disk2/genome/bin/ace2Oligos.perl | ||
| addReads2Consed | phoebus | /disk2/genome/bin/addReads2Consed.perl | ||
| catPhdFiles | phoebus | /disk2/genome/bin/catPhdFiles.perl | ||
| countEditedBases | phoebus | /disk2/genome/bin/countEditedBases.perl | ||
| determineReadTypes | phoebus | /disk2/genome/bin/determineReadTypes.perl | ||
| fasta2Phd | phoebus | /disk2/genome/bin/fasta2Phd.perl | ||
| findSequenceMatchesForConsed | phoebus | /disk2/genome/bin/findSequenceMatchesForConsed.perl | ||
| lib2Phd | phoebus | /disk2/genome/bin/lib2Phd.perl | ||
| mktrace | phoebus | /disk2/genome/bin/mktrace | ||
| phd2Ace | phoebus | /disk2/genome/bin/phd2Ace.perl | ||
| phd2fasta | phoebus | /disk2/genome/bin/phd2fasta | ||
| phredPhrap | phoebus | /disk2/genome/bin/phredPhrap | ||
| removeReads | phoebus | /disk2/genome/bin/removeReads | ||
| revertToUneditedRead | phoebus | /disk2/genome/bin/revertToUneditedRead | ||
| tagRepeats | phoebus | /disk2/genome/bin/tagRepeats.perl | ||
| transferConsensusTags | phoebus | /disk2/genome/bin/transferConsensusTags.perl | ||
| mFold | phoebus | /disk2/mfold-3.1.2/bin/mfold | ||
| PSORTII | predicts protein localisation signals | phoebus | /disk2/psort/psort | |
| repeatmasker | An application to mask repeat regions within a sequence. Depends on crossmatch and RepBaseUpdate? (A databases of known repeat regions | phoebus | /disk2/repeatmasker/RepeatMasker | |
| Process Repeats | phoebus | /disk2/repeatmasker/ProcessRepeats | ||
| wublast | Sequence search application using BLAST developed by University of Washington | phoebus | /disk2/wublast | |
| phrap | phoebus | /disk2/crossmatch/phrap | ||
| phrapview | phoebus | /disk2/crossmatch/phrapview | ||
| phrap | phoebus | /disk2/crossmatch/phrap | ||
| phrap (long reads) | phoebus | /disk2/crossmatch/phrap.longreads | ||
| phrap (many reads) | phoebus | /disk2/crossmatch/phrap.manyreads |
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