Services available through Soaplab

for more information SoaplabAtEBI

Soaplab – EMBOSS services
-------------------------
alignment_consensus::cons
alignment_consensus::megamerger
alignment_consensus::merger
alignment_differences::diffseq
alignment_dot_plots::dotmatcher
alignment_dot_plots::dotpath
alignment_dot_plots::dottup
alignment_dot_plots::polydot
alignment_global::est2genome
alignment_global::needle
alignment_global::stretcher
alignment_local::matcher
alignment_local::seqmatchall
alignment_local::supermatcher
alignment_local::water
alignment_local::wordmatch
alignment_multiple::emma
alignment_multiple::infoalign
alignment_multiple::plotcon
alignment_multiple::prettyplot
alignment_multiple::showalign
alignment_multiple::tranalign
display::cirdna
display::lindna
display::pepnet
display::pepwheel
display::prettyseq
display::remap
display::seealso
display::showdb
display::showfeat
display::showseq
display::sixpack
display::textsearch
edit::biosed
edit::cutseq
edit::degapseq
edit::descseq
edit::entret
edit::extractfeat
edit::extractseq
edit::listor
edit::maskfeat
edit::maskseq
edit::newseq
edit::noreturn
edit::notseq
edit::nthseq
edit::pasteseq
edit::revseq
edit::seqret
edit::seqretsplit
edit::skipseq
edit::splitter
edit::trimest
edit::trimseq
edit::union
edit::vectorstrip
edit::yank
enzyme_kinetics::findkm
feature_tables::coderet
feature_tables::twofeat
information::infoseq
information::tfm
information::whichdb
information::wossname
nucleic_codon_usage::cai
nucleic_codon_usage::chips
nucleic_codon_usage::codcmp
nucleic_codon_usage::cusp
nucleic_codon_usage::syco
nucleic_composition::banana
nucleic_composition::btwisted
nucleic_composition::chaos
nucleic_composition::compseq
nucleic_composition::dan
nucleic_composition::freak
nucleic_composition::isochore
nucleic_composition::sirna
nucleic_composition::wordcount
nucleic_cpg_islands::cpgplot
nucleic_cpg_islands::cpgreport
nucleic_cpg_islands::geecee
nucleic_cpg_islands::newcpgreport
nucleic_cpg_islands::newcpgseek
nucleic_gene_finding::getorf
nucleic_gene_finding::marscan
nucleic_gene_finding::plotorf
nucleic_gene_finding::showorf
nucleic_gene_finding::wobble
nucleic_motifs::dreg
nucleic_motifs::fuzznuc
nucleic_motifs::fuzztran
nucleic_mutation::msbar
nucleic_mutation::shuffleseq
nucleic_primers::eprimer3
nucleic_primers::primersearch
nucleic_primers::stssearch
nucleic_profiles::profit
nucleic_profiles::prophecy
nucleic_profiles::prophet
nucleic_repeats::einverted
nucleic_repeats::equicktandem
nucleic_repeats::etandem
nucleic_repeats::palindrome
nucleic_restriction::recoder
nucleic_restriction::redata
nucleic_restriction::restover
nucleic_restriction::restrict
nucleic_restriction::silent
nucleic_transcription::tfscan
nucleic_translation::backtranseq
nucleic_translation::transeq
phylogeny::distmat
protein_2d_structure::garnier
protein_2d_structure::helixturnhelix
protein_2d_structure::hmoment
protein_2d_structure::pepcoil
protein_2d_structure::tmap
protein_composition::charge
protein_composition::checktrans
protein_composition::emowse
protein_composition::iep
protein_composition::mwfilter
protein_composition::octanol
protein_composition::pepinfo
protein_composition::pepstats
protein_composition::pepwindow
protein_composition::pepwindowall
protein_motifs::antigenic
protein_motifs::digest
protein_motifs::fuzzpro
protein_motifs::oddcomp
protein_motifs::patmatdb
protein_motifs::patmatmotifs
protein_motifs::pestfind
protein_motifs::preg
protein_motifs::pscan
protein_motifs::sigcleave
utils_database_creation::aaindexextract
utils_database_creation::cutgextract
utils_database_creation::printsextract
utils_database_creation::prosextract
utils_database_creation::rebaseextract
utils_database_creation::tfextract
utils_database_indexing::dbiblast
utils_database_indexing::dbifasta
utils_database_indexing::dbiflat
utils_database_indexing::dbigcg
utils_misc::embossdata
utils_misc::embossversion

Soaplab – Other Services
------------------------

protein_structure::jess
Classic::HelloWorld
Classic::HelloWorldWithURL
Classic::MySort
Classic::Sleep
alignment::blastn_ncbi
alignment::blastp_ncbi
alignment::blastx_ncbi

------------------------------------------------------------------
Provided by

Martin Senger
EMBL Outstation - Hinxton                Senger@EBI.ac.uk     
European Bioinformatics Institute        Phone: (+44) 1223 494636      
Wellcome Trust Genome Campus             (Switchboard:     494444)
Hinxton                                  Fax  : (+44) 1223 494468
Cambridge CB10 1SD
United Kingdom                           http://industry.ebi.ac.uk/~senger