Uses of Class
org.embl.ebi.escience.scuflui.workbench.Scavenger

Packages that use Scavenger

net.sf.taverna.tools
net.sourceforge.taverna.scuflworkers.bsf	Provides LocalWorkers capable of handling scripts written in any Bean Scripting Framework language.
nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor
nl.utwente.ewi.hmi.taverna.scuflworkers.rshell
org.biomoby.client.taverna.plugin
org.embl.ebi.escience.scuflui.workbench
org.embl.ebi.escience.scuflui.workbench.scavenger.spi
org.embl.ebi.escience.scuflworkers
org.embl.ebi.escience.scuflworkers.apiconsumer
org.embl.ebi.escience.scuflworkers.beanshell
org.embl.ebi.escience.scuflworkers.biomart
org.embl.ebi.escience.scuflworkers.biomoby
org.embl.ebi.escience.scuflworkers.inferno
org.embl.ebi.escience.scuflworkers.java
org.embl.ebi.escience.scuflworkers.notification
org.embl.ebi.escience.scuflworkers.rdfgenerator
org.embl.ebi.escience.scuflworkers.rserv
org.embl.ebi.escience.scuflworkers.soaplab
org.embl.ebi.escience.scuflworkers.stringconstant
org.embl.ebi.escience.scuflworkers.talisman
org.embl.ebi.escience.scuflworkers.web
org.embl.ebi.escience.scuflworkers.workflow
org.embl.ebi.escience.scuflworkers.wsdl

Uses of Scavenger in net.sf.taverna.tools

Methods in net.sf.taverna.tools that return types with arguments of type Scavenger

static java.util.List<Scavenger>

Scavengers.getScavengers() Get the full list of default/configured scavengers for this Taverna installation.

Uses of Scavenger in net.sourceforge.taverna.scuflworkers.bsf

Subclasses of Scavenger in net.sourceforge.taverna.scuflworkers.bsf

class

BSFScavenger A scavenger that knows how to create bsf processors

Uses of Scavenger in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor

Subclasses of Scavenger in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor

class

APScavenger The scavanger for abstract processors

Uses of Scavenger in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell

Subclasses of Scavenger in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell

class

RshellScavenger A scavenger that knows how to create Rserv processors

Uses of Scavenger in org.biomoby.client.taverna.plugin

Subclasses of Scavenger in org.biomoby.client.taverna.plugin

class	BiomobyObjectScavenger Deprecated.
class	BiomobyScavenger A Scavenger that knows how to get all the Biomoby services from a specified Biomoby Central Registry.
class	MobyParseDatatypeScavenger A scavenger that instantiates the Parser.

Methods in org.biomoby.client.taverna.plugin that return types with arguments of type Scavenger

java.util.Set<Scavenger>	BiomobyScavengerHelper.getDefaults()
java.util.Set<Scavenger>	BiomobyObjectScavengerHelper.getDefaults() Deprecated. This ScavengerHelper has no defaults
java.util.Set<Scavenger>	BiomobyScavengerHelper.getFromModel(ScuflModel model)
java.util.Set<Scavenger>	BiomobyObjectScavengerHelper.getFromModel(ScuflModel model) Deprecated.

Methods in org.biomoby.client.taverna.plugin with parameters of type Scavenger

boolean	BiomobyScavengerAction.canHandle(Scavenger scavenger)
java.awt.event.ActionListener	BiomobyScavengerAction.getListener(Scavenger scavenger)

Uses of Scavenger in org.embl.ebi.escience.scuflui.workbench

Subclasses of Scavenger in org.embl.ebi.escience.scuflui.workbench

class	FileScavenger A scavenger which traverses the filesystem from the specified point looking for workflow definitions and creating corresponding workflow scavengers if it finds any
class	URLBasedScavenger

Methods in org.embl.ebi.escience.scuflui.workbench that return Scavenger

abstract Scavenger

URLBasedScavenger.fromURL(java.net.URL theURL)

Methods in org.embl.ebi.escience.scuflui.workbench that return types with arguments of type Scavenger

java.util.Set<Scavenger>

ScavengerHelperThreadPool.getCompleted() Returns a Set of Scavengers that have completed their initialisation

Methods in org.embl.ebi.escience.scuflui.workbench with parameters of type Scavenger

void	DefaultScavengerTree.addScavenger(Scavenger theScavenger)
void	ScavengerTree.addScavenger(Scavenger theScavenger) Add a new scavenger to the tree, firing appropriate model events as we do.

Uses of Scavenger in org.embl.ebi.escience.scuflui.workbench.scavenger.spi

Methods in org.embl.ebi.escience.scuflui.workbench.scavenger.spi that return types with arguments of type Scavenger

java.util.List<Scavenger>

ScavengerRegistry.getScavengers() Returns instances of all Scavengers defined as an SPI

Methods in org.embl.ebi.escience.scuflui.workbench.scavenger.spi with parameters of type Scavenger

boolean	ScavengerActionSPI.canHandle(Scavenger scavenger) Can this action handle the specified scavenger? Return true if this action is applicable.
java.util.List<ScavengerActionSPI>	ScavengerActionRegistry.getActions(Scavenger scavenger) returns all ScavengerActionSPI's that can handle the specified Scavenger type.
java.awt.event.ActionListener	ScavengerActionSPI.getListener(Scavenger scavenger) Return an ActionListener to be attached to whatever component is being generated.

Uses of Scavenger in org.embl.ebi.escience.scuflworkers

Methods in org.embl.ebi.escience.scuflworkers that return types with arguments of type Scavenger

java.util.Set<Scavenger>	ScavengerHelper.getDefaults() Defines the default scavengers in the service panel
java.util.Set<Scavenger>	ScavengerHelper.getFromModel(ScuflModel model) Extracts the scavengers from a ScuflModel for adding to the service panel

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.apiconsumer

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.apiconsumer

class

APIConsumerScavenger Scavenger driven off an XML file created by the APIConsumer tool.

Methods in org.embl.ebi.escience.scuflworkers.apiconsumer that return types with arguments of type Scavenger

java.util.Set<Scavenger>	APIConsumerScavengerHelper.getDefaults()
java.util.Set<Scavenger>	APIConsumerScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.beanshell

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.beanshell

class

BeanshellScavenger A scavenger that knows how to create beanshell processors

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.biomart

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.biomart

class

BiomartScavenger

Methods in org.embl.ebi.escience.scuflworkers.biomart that return Scavenger

Scavenger

BiomartScavenger.fromURL(java.net.URL theURL)

Methods in org.embl.ebi.escience.scuflworkers.biomart that return types with arguments of type Scavenger

java.util.Set<Scavenger>	BiomartScavengerHelper.getDefaults()
java.util.Set<Scavenger>	BiomartScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.biomoby

Methods in org.embl.ebi.escience.scuflworkers.biomoby that return types with arguments of type Scavenger

java.util.Set<Scavenger>	BiomobyScavengerHelper.getDefaults()
java.util.Set<Scavenger>	BiomobyScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.inferno

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.inferno

class

InfernoScavenger Collects the various services within a specified SGS container

Methods in org.embl.ebi.escience.scuflworkers.inferno that return types with arguments of type Scavenger

java.util.Set<Scavenger>	InfernoScavengerHelper.getDefaults()
java.util.Set<Scavenger>	InfernoScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.java

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.java

class

LocalServiceScavenger A scavenger that can create new LocalServiceProcessor nodes.

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.notification

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.notification

class

NotificationScavenger Scavenger for Processor for publishing notifications to the myGrid notification service.

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.rdfgenerator

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.rdfgenerator

class

RDFGeneratorScavenger A Scavenger that knows how to create rdf generator nodes

Methods in org.embl.ebi.escience.scuflworkers.rdfgenerator that return types with arguments of type Scavenger

java.util.Set<Scavenger>	RDFGeneratorScavengerHelper.getDefaults() This ScavengerHelper has no defaults
java.util.Set<Scavenger>	RDFGeneratorScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.rserv

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.rserv

class

RservScavenger A scavenger that knows how to create Rserv processors

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.soaplab

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.soaplab

class

SoaplabScavenger A Scavenger that knows how to get all the Soaplab services from a specified installation

Methods in org.embl.ebi.escience.scuflworkers.soaplab that return types with arguments of type Scavenger

java.util.Set<Scavenger>	SoaplabScavengerHelper.getDefaults()
java.util.Set<Scavenger>	SoaplabScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.stringconstant

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.stringconstant

class

StringConstantScavenger A Scavenger that knows how to create string constant nodes

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.talisman

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.talisman

class

TalismanScavenger A Scavenger that knows how to load Talisman scripts

Methods in org.embl.ebi.escience.scuflworkers.talisman that return types with arguments of type Scavenger

java.util.Set<Scavenger>	TalismanScavengerHelper.getDefaults()
java.util.Set<Scavenger>	TalismanScavengerHelper.getFromModel(ScuflModel model)

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.web

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.web

class

WebScavenger A scavenger that does a web crawl starting at the specified URL to find scufl xml files.

Methods in org.embl.ebi.escience.scuflworkers.web that return types with arguments of type Scavenger

java.util.Set<Scavenger>	WebScavengerHelperImpl.getDefaults() Always returns an empty set, WebScavengerHelper defaults are found using getDefaults(ScavengerTree tree).
java.util.Set<Scavenger>	WebScavengerHelperImpl.getDefaults(javax.swing.tree.DefaultTreeModel theModel) Returns the defaults, determined by taverna.defaultweb within the mygrid.properties file.
java.util.Set<Scavenger>	WebScavengerHelper.getDefaults(javax.swing.tree.DefaultTreeModel tree) The same as getDefaults in ScavengerHelper, except that ScavengerTree is required to construct the WebScavengers.
java.util.Set<Scavenger>	WebScavengerHelperImpl.getFromModel(ScuflModel model) Currently doesn't attempt to extract scavengers from the model, so always returns an empty Set.

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.workflow

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.workflow

class

WorkflowScavenger A Scavenger that knows how to load nested workflow scripts

Methods in org.embl.ebi.escience.scuflworkers.workflow that return Scavenger

Scavenger

WorkflowScavenger.fromURL(java.net.URL url)

Methods in org.embl.ebi.escience.scuflworkers.workflow that return types with arguments of type Scavenger

java.util.Set<Scavenger>	WorkflowScavengerHelper.getDefaults() This ScavengerHelper has no defaults
java.util.Set<Scavenger>	WorkflowScavengerHelper.getFromModel(ScuflModel model) WorkflowScavengers are not extracted from the model, so this always returns an empty Set

Uses of Scavenger in org.embl.ebi.escience.scuflworkers.wsdl

Subclasses of Scavenger in org.embl.ebi.escience.scuflworkers.wsdl

class

WSDLBasedScavenger A Scavenger that knows how to inspect a given wsdl document for all available port types and operations within them.

Methods in org.embl.ebi.escience.scuflworkers.wsdl that return Scavenger

Scavenger

WSDLBasedScavenger.fromURL(java.net.URL theURL)

Methods in org.embl.ebi.escience.scuflworkers.wsdl that return types with arguments of type Scavenger

java.util.Set<Scavenger>	WSDLScavengerHelper.getDefaults() returns the default Scavenger set
java.util.Set<Scavenger>	WSDLScavengerHelper.getFromModel(ScuflModel model)