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| Uses of Processor in net.sourceforge.taverna.scuflworkers.bsf |
|---|
| Subclasses of Processor in net.sourceforge.taverna.scuflworkers.bsf | |
|---|---|
class |
BSFProcessor
A processor that uses the BSF scripting engine to allow arbitrary scripts to be invoked on workflow data. |
| Methods in net.sourceforge.taverna.scuflworkers.bsf that return Processor | |
|---|---|
Processor |
BSFXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in net.sourceforge.taverna.scuflworkers.bsf with parameters of type Processor | |
|---|---|
org.jdom.Element |
BSFXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
BSFEditor.getListener(Processor theProcessor)
|
| Constructors in net.sourceforge.taverna.scuflworkers.bsf with parameters of type Processor | |
|---|---|
BSFTask(Processor p)
|
|
| Uses of Processor in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor |
|---|
| Subclasses of Processor in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor | |
|---|---|
class |
APProcessor
The abstract processor is a processor that contains a set of input ports and output ports and a brief description what it should do If the processor has an alternate, it executes the alternate, otherwise it does nothing |
| Methods in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor that return Processor | |
|---|---|
Processor |
APXMLHandler.loadProcessorFromXML(org.jdom.Element processorElement,
ScuflModel model,
java.lang.String name)
Method for loading an xml processor from XML |
| Methods in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor with parameters of type Processor | |
|---|---|
org.jdom.Element |
APXMLHandler.elementForProcessor(Processor processor)
Method for getting the xml element for the processor |
java.awt.event.ActionListener |
APEditor.getListener(Processor theProcessor)
Method for getting the listener for the editor |
| Constructors in nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor with parameters of type Processor | |
|---|---|
APTask(Processor processor)
Constructor of the task object |
|
| Uses of Processor in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell |
|---|
| Subclasses of Processor in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell | |
|---|---|
class |
RshellProcessor
A processor that uses the Rshell scripting engine to allow R (the free version of S) to be invoked on workflow data. |
| Methods in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell that return Processor | |
|---|---|
Processor |
RshellXMLHandler.loadProcessorFromXML(org.jdom.Element processorElement,
ScuflModel model,
java.lang.String name)
Method for loading an xml processor from XML |
| Methods in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell with parameters of type Processor | |
|---|---|
org.jdom.Element |
RshellXMLHandler.elementForProcessor(Processor processor)
Method for getting the xml element for the processor |
java.awt.event.ActionListener |
RshellEditor.getListener(Processor theProcessor)
|
| Constructors in nl.utwente.ewi.hmi.taverna.scuflworkers.rshell with parameters of type Processor | |
|---|---|
RshellInputPort(Processor processor,
java.lang.String name)
Constructor for input port |
|
RshellOutputPort(Processor processor,
java.lang.String name)
Constructor |
|
RshellTask(Processor processor)
Constructor |
|
| Uses of Processor in org.biomoby.client.taverna.plugin |
|---|
| Subclasses of Processor in org.biomoby.client.taverna.plugin | |
|---|---|
class |
BiomobyObjectProcessor
|
class |
BiomobyProcessor
A processor based on the Biomoby compliant web services. |
class |
MobyParseDatatypeProcessor
A processor that breaks up a Moby datatype into its component parts minus all the moby wrappings. |
| Methods in org.biomoby.client.taverna.plugin that return Processor | |
|---|---|
Processor |
MobyParseDatatypeXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
Processor |
BiomobyXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String processorName)
|
Processor |
BiomobyObjectXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String processorName)
|
| Methods in org.biomoby.client.taverna.plugin with parameters of type Processor | |
|---|---|
boolean |
ConfigureMobyServiceAction.canHandle(Processor processor)
|
boolean |
BiomobyWidgetAction.canHandle(Processor processor)
|
boolean |
BiomobyObjectAction.canHandle(Processor processor)
|
boolean |
BiomobyAction.canHandle(Processor processor)
|
boolean |
AddParserAction.canHandle(Processor processor)
|
org.jdom.Element |
MobyParseDatatypeXMLHandler.elementForProcessor(Processor p)
|
org.jdom.Element |
BiomobyXMLHandler.elementForProcessor(Processor p)
|
org.jdom.Element |
BiomobyObjectXMLHandler.elementForProcessor(Processor p)
|
javax.swing.JComponent |
ConfigureMobyServiceAction.getComponent(Processor processor)
|
javax.swing.JComponent |
BiomobyWidgetAction.getComponent(Processor processor)
|
javax.swing.JComponent |
BiomobyObjectAction.getComponent(Processor processor)
|
javax.swing.JComponent |
BiomobyAction.getComponent(Processor processor)
|
javax.swing.JComponent |
AddParserAction.getComponent(Processor processor)
|
| Method parameters in org.biomoby.client.taverna.plugin with type arguments of type Processor | |
|---|---|
java.lang.String |
BiomobyProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
|
| Constructors in org.biomoby.client.taverna.plugin with parameters of type Processor | |
|---|---|
BiomobyObjectTask(Processor p)
|
|
BiomobyTask(Processor p)
|
|
CopyOfBiomobyTask(Processor p)
|
|
MobyParseDatatypeTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scufl |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scufl | |
|---|---|
class |
InternalSinkPortHolder
A Processor subclass to hold ports for the overall workflow outputs, these ports are therefore held as input ports, acting as they do as data sinks. |
class |
InternalSourcePortHolder
A Processor subclass to hold ports for the overal workflow inputs. |
| Methods in org.embl.ebi.escience.scufl that return Processor | |
|---|---|
Processor |
ConcurrencyConstraint.getControllingProcessor()
Return the processor whos state is controlling the transition of the target processor |
Processor |
AlternateProcessor.getOriginalProcessor()
Return the processor for which this container holds the alternate implementation. |
Processor |
Port.getProcessor()
Get the processor that this port belongs to. |
Processor |
IProcessorTask.getProcessor()
|
Processor |
AlternateProcessor.getProcessor()
Return the alternate processor object. |
Processor[] |
ScuflModel.getProcessors()
Return an array of the Processor objects defined by this workflow model |
Processor[] |
ScuflModel.getProcessorsOfType(java.lang.Class type)
Returns an array of Processors that are an instance of the Class |
Processor |
ConcurrencyConstraint.getTargetProcessor()
Return the processor that this constraint is regulating |
Processor |
ScuflModel.getWorkflowSinkProcessor()
Return the internal processor that holds the overall workflow sink ports |
Processor |
ScuflModel.getWorkflowSourceProcessor()
Return the internal processor that represents the workflow sources. |
Processor |
ScuflModel.locateProcessor(java.lang.String processor_name)
Locate a named processor |
| Methods in org.embl.ebi.escience.scufl with parameters of type Processor | |
|---|---|
void |
ScuflModel.addProcessor(Processor processor)
Add a processor to the model. |
void |
ScuflModel.destroyProcessor(Processor processor)
Destroy a processor, this also removes any data constraints that have the processor as either a source or a sink. |
void |
AlternateProcessor.setOriginalProcessor(Processor p)
|
| Constructors in org.embl.ebi.escience.scufl with parameters of type Processor | |
|---|---|
AlternateProcessor(Processor alternate)
|
|
ConcurrencyConstraint(ScuflModel model,
java.lang.String name,
Processor controller,
Processor target,
int targetStateFrom,
int targetStateTo,
int controllerStateGuard)
Create a new concurrency constraint. |
|
InputPort(Processor processor,
java.lang.String name)
|
|
IterationStrategy(Processor p)
Create a new IterationStrategy with the default iteration strategy for the supplied processor |
|
OutputPort(Processor processor,
java.lang.String name)
|
|
Port(Processor processor,
java.lang.String name)
Create a new port (obviously you can't actually construct this because it's abstract. |
|
| Uses of Processor in org.embl.ebi.escience.scufl.enactor.event |
|---|
| Methods in org.embl.ebi.escience.scufl.enactor.event that return Processor | |
|---|---|
Processor |
ProcessFailureEvent.getProcessor()
|
Processor |
ProcessCompletionEvent.getProcessor()
|
Processor |
NestedWorkflowFailureEvent.getProcessor()
|
Processor |
NestedWorkflowCompletionEvent.getProcessor()
|
Processor |
IterationCompletionEvent.getProcessor()
|
| Constructors in org.embl.ebi.escience.scufl.enactor.event with parameters of type Processor | |
|---|---|
IterationCompletionEvent(java.util.Map structureMapping,
java.util.Map inputShredding,
WorkflowInstance wf,
Processor activeProcessor,
java.util.List associatedCompletionEvents,
java.util.Map inputs,
java.util.Map outputs)
|
|
NestedWorkflowCompletionEvent(boolean isIterating,
java.util.Map inputs,
java.util.Map outputs,
Processor proc,
WorkflowInstance workflow,
WorkflowInstance nestedWorkflow)
|
|
NestedWorkflowFailureEvent(WorkflowInstance workflow,
Processor processor,
java.lang.Exception cause,
java.util.Map inputs,
WorkflowInstance nestedWorkflow)
|
|
ProcessCompletionEvent(boolean isIterating,
java.util.Map inputs,
java.util.Map outputs,
Processor proc,
WorkflowInstance workflow)
|
|
ProcessFailureEvent(WorkflowInstance workflow,
Processor processor,
java.lang.Exception cause,
java.util.Map inputs)
|
|
| Uses of Processor in org.embl.ebi.escience.scufl.provenance.process |
|---|
| Constructors in org.embl.ebi.escience.scufl.provenance.process with parameters of type Processor | |
|---|---|
AlternateProcessScheduled(Processor p)
Create a new event corresponding to the scheduling of the specified processor |
|
ProcessCancelled(Processor p)
Create a new event corresponding to the pausing of the specified processor |
|
ProcessPaused(Processor p)
Create a new event corresponding to the pausing of the specified processor |
|
ProcessScheduled(Processor p)
Create a new event corresponding to the scheduling of the specified processor |
|
| Uses of Processor in org.embl.ebi.escience.scufl.view |
|---|
| Methods in org.embl.ebi.escience.scufl.view with parameters of type Processor | |
|---|---|
static java.lang.String |
WorkflowSummaryAsHTML.nameFor(java.util.Map names,
Processor p)
|
| Uses of Processor in org.embl.ebi.escience.scuflui |
|---|
| Methods in org.embl.ebi.escience.scuflui with parameters of type Processor | |
|---|---|
void |
IterationStrategyEditor.attachToModel(Processor p)
|
void |
TemplateEditor.attachToModel(Processor p)
|
| Constructors in org.embl.ebi.escience.scuflui with parameters of type Processor | |
|---|---|
TemplateEditor(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflui.actions |
|---|
| Methods in org.embl.ebi.escience.scuflui.actions with parameters of type Processor | |
|---|---|
boolean |
UnsetBoringAction.canHandle(Processor processor)
|
boolean |
SetBoringAction.canHandle(Processor processor)
|
java.util.List<ProcessorActionSPI> |
ProcessorActionRegistry.getActions(Processor processor)
Return a List containing all instances of the ProcessorActionSPI which think they can operate on the specified processor |
abstract javax.swing.JComponent |
AbstractProcessorAction.getComponent(Processor processor)
Implement this to define the component which will be created in the new UIUtils frame when the menu item, button or whatever is activated |
java.awt.event.ActionListener |
SetBoringAction.getListener(Processor processor)
|
java.awt.event.ActionListener |
AbstractProcessorAction.getListener(Processor processor)
|
| Uses of Processor in org.embl.ebi.escience.scuflui.results |
|---|
| Methods in org.embl.ebi.escience.scuflui.results that return Processor | |
|---|---|
Processor |
ResultSource.getProcessor()
|
| Methods in org.embl.ebi.escience.scuflui.results with parameters of type Processor | |
|---|---|
void |
ResultSource.addOutputProcessor(Processor processor)
|
| Uses of Processor in org.embl.ebi.escience.scuflui.spi |
|---|
| Methods in org.embl.ebi.escience.scuflui.spi with parameters of type Processor | |
|---|---|
void |
ProcessorViewSPI.attachToModel(Processor p)
Directs the implementing component to bind to the specified Processor instance, refresh its internal state from the model and commence listening to events, maintaining its state as these events dictate. |
boolean |
ProcessorActionSPI.canHandle(Processor processor)
Can this action handle the specified processor? Return true if this action is applicable. |
java.awt.event.ActionListener |
ProcessorActionSPI.getListener(Processor processor)
Return an ActionListener to be attached to whatever component is being generated. |
| Uses of Processor in org.embl.ebi.escience.scuflworkers |
|---|
| Methods in org.embl.ebi.escience.scuflworkers that return Processor | |
|---|---|
Processor |
ProcessorFactory.createProcessor(java.lang.String name,
ScuflModel model)
Instantiate a new processor with the supplied name and bind it to the specified model. |
static Processor |
ProcessorHelper.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
Spit back a processor given a chunk of xml, the element passed in being the 'processor' tag return null if we can't handle it |
Processor |
XMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
Create a new processor from the given chunk of XML |
| Methods in org.embl.ebi.escience.scuflworkers with parameters of type Processor | |
|---|---|
static org.jdom.Element |
ProcessorHelper.elementForProcessor(Processor p)
Given a processor instance, return the 'spec' block of XML that represents the processor in the XScufl language. |
org.jdom.Element |
XMLHandler.elementForProcessor(Processor p)
Return the spec element, that is to say the processor specific portion of the processor element. |
static org.jdom.Element |
ProcessorHelper.elementForProcessor(Processor p,
boolean decorations)
Given a processor instance, return the 'spec' block of XML that represents the processor in the XScufl language. |
java.awt.event.ActionListener |
ProcessorEditor.getListener(Processor theProcessor)
Return an action listener to edit the processor when invoked from the context menu. |
static java.lang.String |
ProcessorHelper.getPreferredColour(Processor p)
Given a processor instance, return the preferred colour to be used for UI representations. |
static javax.swing.ImageIcon |
ProcessorHelper.getPreferredIcon(Processor p)
Given a processor instance, return an image icon to be used in, for example, tree renderer objects. |
static java.lang.String |
ProcessorHelper.getTaskClassName(Processor p)
Given a processor instance, return the fully qualified class name of a TavernaTask for the myGrid enactor to invoke the operation represented by the processor |
static ProcessorTaskWorker |
ProcessorHelper.getTaskWorker(Processor p)
Given a processor instance, return a concrete task worker for that instance. |
| Method parameters in org.embl.ebi.escience.scuflworkers with type arguments of type Processor | |
|---|---|
java.lang.String |
HTMLSummarisableProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
Generates the html tables for a list of processors, creating a table grouped by resource host. |
| Uses of Processor in org.embl.ebi.escience.scuflworkers.apiconsumer |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.apiconsumer | |
|---|---|
class |
APIConsumerProcessor
Processor for the API consumer worker |
| Methods in org.embl.ebi.escience.scuflworkers.apiconsumer that return Processor | |
|---|---|
Processor |
APIConsumerXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.apiconsumer with parameters of type Processor | |
|---|---|
org.jdom.Element |
APIConsumerXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
APIConsumerEditor.getListener(Processor theProcessor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.apiconsumer with parameters of type Processor | |
|---|---|
APIConsumerTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.beanshell |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.beanshell | |
|---|---|
class |
BeanshellProcessor
A processor that uses the Beanshell scripting engine to allow arbitrary java scripts to be invoked on workflow data. |
| Methods in org.embl.ebi.escience.scuflworkers.beanshell that return Processor | |
|---|---|
Processor |
BeanshellXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.beanshell with parameters of type Processor | |
|---|---|
org.jdom.Element |
BeanshellXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
BeanshellEditor.getListener(Processor theProcessor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.beanshell with parameters of type Processor | |
|---|---|
BeanshellTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.biomart |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.biomart | |
|---|---|
class |
BiomartProcessor
|
| Methods in org.embl.ebi.escience.scuflworkers.biomart that return Processor | |
|---|---|
Processor |
BiomartXMLHandler.loadProcessorFromXML(org.jdom.Element element,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.biomart with parameters of type Processor | |
|---|---|
org.jdom.Element |
BiomartXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
BiomartEditor.getListener(Processor theProcessor)
|
| Method parameters in org.embl.ebi.escience.scuflworkers.biomart with type arguments of type Processor | |
|---|---|
java.lang.String |
BiomartProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
|
| Constructors in org.embl.ebi.escience.scuflworkers.biomart with parameters of type Processor | |
|---|---|
BiomartTask(Processor p)
Constructs a BiomartTask. |
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.biomoby |
|---|
| Methods in org.embl.ebi.escience.scuflworkers.biomoby that return Processor | |
|---|---|
Processor |
BiomobyXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String processorName)
|
| Methods in org.embl.ebi.escience.scuflworkers.biomoby with parameters of type Processor | |
|---|---|
org.jdom.Element |
BiomobyXMLHandler.elementForProcessor(Processor p)
|
| Method parameters in org.embl.ebi.escience.scuflworkers.biomoby with type arguments of type Processor | |
|---|---|
java.lang.String |
BiomobyProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
|
| Constructors in org.embl.ebi.escience.scuflworkers.biomoby with parameters of type Processor | |
|---|---|
BiomobyTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.dependency |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.dependency | |
|---|---|
class |
DependencyProcessor
A processor that needs dependency management. |
| Uses of Processor in org.embl.ebi.escience.scuflworkers.inferno |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.inferno | |
|---|---|
class |
InfernoProcessor
Processor corresponding to a single instance of an SGS based streaming service. |
| Methods in org.embl.ebi.escience.scuflworkers.inferno that return Processor | |
|---|---|
Processor |
InfernoXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.inferno with parameters of type Processor | |
|---|---|
org.jdom.Element |
InfernoXMLHandler.elementForProcessor(Processor p)
|
| Constructors in org.embl.ebi.escience.scuflworkers.inferno with parameters of type Processor | |
|---|---|
InfernoTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.java |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.java | |
|---|---|
class |
LocalServiceProcessor
A processor that runs the quick Java plugins defined by the LocalService interface in this package. |
| Methods in org.embl.ebi.escience.scuflworkers.java that return Processor | |
|---|---|
Processor |
LocalServiceXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.java with parameters of type Processor | |
|---|---|
org.jdom.Element |
LocalServiceXMLHandler.elementForProcessor(Processor p)
|
| Constructors in org.embl.ebi.escience.scuflworkers.java with parameters of type Processor | |
|---|---|
LocalServiceTask(Processor p)
|
|
XMLSplittableInputPort(Processor processor,
java.lang.String name)
|
|
XMLSplittableOutputPort(Processor processor,
java.lang.String name)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.java.actions |
|---|
| Methods in org.embl.ebi.escience.scuflworkers.java.actions with parameters of type Processor | |
|---|---|
boolean |
SliceListEditAction.canHandle(Processor processor)
Only handles LocalServiceProcessor based on SliceList |
boolean |
FlattenListEditAction.canHandle(Processor processor)
Only handles LocalServiceProcessor based on FlattenList |
javax.swing.JComponent |
SliceListEditAction.getComponent(Processor processor)
|
javax.swing.JComponent |
FlattenListEditAction.getComponent(Processor processor)
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.notification |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.notification | |
|---|---|
class |
NotificationProcessor
A Processor for publishing notifications to the myGrid notification service. |
| Methods in org.embl.ebi.escience.scuflworkers.notification that return Processor | |
|---|---|
Processor |
NotificationXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.notification with parameters of type Processor | |
|---|---|
org.jdom.Element |
NotificationXMLHandler.elementForProcessor(Processor processor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.notification with parameters of type Processor | |
|---|---|
NotificationProcessorTask(Processor p)
Creates a new instance of NotificationProcessorTaskImpl The processor used here is a dummy processor just to plug in to taverna for gui purposes. |
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.rdfgenerator |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.rdfgenerator | |
|---|---|
class |
RDFGeneratorProcessor
A processor to generate rdf statements |
| Methods in org.embl.ebi.escience.scuflworkers.rdfgenerator that return Processor | |
|---|---|
Processor |
RDFGeneratorXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.rdfgenerator with parameters of type Processor | |
|---|---|
org.jdom.Element |
RDFGeneratorXMLHandler.elementForProcessor(Processor p)
|
| Constructors in org.embl.ebi.escience.scuflworkers.rdfgenerator with parameters of type Processor | |
|---|---|
RDFGeneratorTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.rserv |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.rserv | |
|---|---|
class |
RservProcessor
A processor that uses the Rserv scripting engine to allow R (the free version of S) to be invoked on workflow data. |
| Methods in org.embl.ebi.escience.scuflworkers.rserv that return Processor | |
|---|---|
Processor |
RservXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.rserv with parameters of type Processor | |
|---|---|
org.jdom.Element |
RservXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
RservEditor.getListener(Processor theProcessor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.rserv with parameters of type Processor | |
|---|---|
RservInputPort(Processor processor,
java.lang.String name)
|
|
RservTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.soaplab |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.soaplab | |
|---|---|
class |
SoaplabProcessor
A processor based on the Soaplab web service around the EMBOSS tools. |
| Methods in org.embl.ebi.escience.scuflworkers.soaplab that return Processor | |
|---|---|
Processor |
SoaplabXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.soaplab with parameters of type Processor | |
|---|---|
boolean |
SoaplabDescriberPanel.canHandle(Processor processor)
|
org.jdom.Element |
SoaplabXMLHandler.elementForProcessor(Processor p)
|
javax.swing.JComponent |
SoaplabDescriberPanel.getComponent(Processor processor)
|
java.awt.event.ActionListener |
PollingPropertiesEditor.getListener(Processor theProcessor)
|
| Method parameters in org.embl.ebi.escience.scuflworkers.soaplab with type arguments of type Processor | |
|---|---|
java.lang.String |
SoaplabProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
|
| Constructors in org.embl.ebi.escience.scuflworkers.soaplab with parameters of type Processor | |
|---|---|
SoaplabTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.stringconstant |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.stringconstant | |
|---|---|
class |
StringConstantProcessor
A processor to contain a single string constant |
| Methods in org.embl.ebi.escience.scuflworkers.stringconstant that return Processor | |
|---|---|
Processor |
StringConstantXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.stringconstant with parameters of type Processor | |
|---|---|
org.jdom.Element |
StringConstantXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
StringConstantEditor.getListener(Processor theProcessor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.stringconstant with parameters of type Processor | |
|---|---|
StringConstantTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.talisman |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.talisman | |
|---|---|
class |
TalismanProcessor
A processor that makes use of a local installation of the Talisman classes to perform its operations. |
| Methods in org.embl.ebi.escience.scuflworkers.talisman that return Processor | |
|---|---|
Processor |
TalismanXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.talisman with parameters of type Processor | |
|---|---|
org.jdom.Element |
TalismanXMLHandler.elementForProcessor(Processor p)
|
| Constructors in org.embl.ebi.escience.scuflworkers.talisman with parameters of type Processor | |
|---|---|
TalismanTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.workflow |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.workflow | |
|---|---|
class |
WorkflowProcessor
A processor containing a full ScuflModel instance. |
| Methods in org.embl.ebi.escience.scuflworkers.workflow that return Processor | |
|---|---|
Processor |
WorkflowXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.workflow with parameters of type Processor | |
|---|---|
boolean |
WorkflowEditProcessorAction.canHandle(Processor processor)
|
org.jdom.Element |
WorkflowXMLHandler.elementForProcessor(Processor p)
|
java.awt.event.ActionListener |
WorkflowEditProcessorAction.getListener(Processor processor)
|
| Constructors in org.embl.ebi.escience.scuflworkers.workflow with parameters of type Processor | |
|---|---|
WorkflowTask(Processor p)
|
|
| Uses of Processor in org.embl.ebi.escience.scuflworkers.wsdl |
|---|
| Subclasses of Processor in org.embl.ebi.escience.scuflworkers.wsdl | |
|---|---|
class |
WSDLBasedProcessor
A processor based on an operation defined within a WSDL file accessible to the class at construction time. |
| Methods in org.embl.ebi.escience.scuflworkers.wsdl that return Processor | |
|---|---|
Processor |
WSDLXMLHandler.loadProcessorFromXML(org.jdom.Element processorNode,
ScuflModel model,
java.lang.String name)
|
| Methods in org.embl.ebi.escience.scuflworkers.wsdl with parameters of type Processor | |
|---|---|
org.jdom.Element |
WSDLXMLHandler.elementForProcessor(Processor p)
|
| Method parameters in org.embl.ebi.escience.scuflworkers.wsdl with type arguments of type Processor | |
|---|---|
java.lang.String |
WSDLBasedProcessor.getHTMLSummary(java.util.List<HTMLSummarisableProcessor> processors,
java.util.Map<java.lang.String,Processor> names)
|
| Constructors in org.embl.ebi.escience.scuflworkers.wsdl with parameters of type Processor | |
|---|---|
WSDLInvocationTask(Processor p)
|
|
| Uses of Processor in uk.ac.soton.itinnovation.taverna.enactor.entities |
|---|
| Methods in uk.ac.soton.itinnovation.taverna.enactor.entities that return Processor | |
|---|---|
Processor |
ProcessorTask.getProcessor()
Retrieves the XScufl Processor object for this task |
| Constructors in uk.ac.soton.itinnovation.taverna.enactor.entities with parameters of type Processor | |
|---|---|
ProcessorTask(java.lang.String id,
uk.ac.soton.itinnovation.freefluo.core.flow.Flow flow,
Processor p,
uk.ac.soton.itinnovation.freefluo.task.LogLevel l,
java.lang.String userID,
java.lang.String userCtx)
|
|
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