As part of a with the Netherlands BioInformatics Centre BioAssist project, two developers from NBIC are working on extending the infrastructure available within the Taverna Workbench.
Pages and publications about collaboration -- Results 1 to 10 of 16
The Virtual Laboratory for e-Science (vl-e) is a consortium representing twenty-six companies and academic institutions throughout the Netherlands. Its mission is “to boost e-Science by creating an e-Science environment and carrying out research on methodologies”.
The Netherlands Bioinformatics Centre is actively working with the myGrid team as part of the NBIC BioAssist project and Marco [...]
In addition to projects explicitly associated with myGrid, the following projects are known to use Taverna Workbench:
AstroGrid
BioMart
caBig
Coordination And Sustainability of International Mouse Informatics Resources (CASIMIR)
Chemistry Development Kit (CDK)
Developmental Gene Expression Map
electronic Cultural Heritage made Accessible for Sustainable Exploitation (eChase)
eFamily
Enabling Grids for e-SciencE (EGEE)
EMBRACE
Enabling Systems Biology (ENFIN)
The GOLD Project
iPlant Collaborative
Complex In-Silico Experiments in Integrative Biology [...]
The myGrid team actively participate in the efforts of the International Provenance and Annotation Workshops, in particular in the provenance challenges.
The provenance model used by Taverna Workbench is being revised. This research is influenced by the experiences of the OntoGrid project, by the Open Provenance Model and also the team’s experience in this [...]
The myGrid team collaborate with the EGEE project who produced the Moteur system. That system allows Taverna Workbench workflows to be run over a gLite grid.
The myGrid team are currently collaborating with the caGrid team to produce a Taverna processor to allow execution of services over a grid.
The myGrid team are working with the [...]
The fact that a workflow once ran correctly does not mean that it will always run correctly. Several projects are investigating how problems with a workflow can be avoided or detected.
The myGrid team are taking an interest in the work of the CARMEN project at the University of Newcastle. CARMEN is taking the [...]
The myGrid team have collaborated with the Renaissance Computing Institute at the University of North Carolina. Taverna Workbench workflow execution has been incorporated into the RENCI Science gateway.
The Extreme! Computing group at Indiana University are involved in “several Grid Portal projects that aim to create problem solving environments that allow scientists to program, access and execute distributed Grid applications from a conventional Web Browser”. They have developed tools to interface to the Linked Environments for Atmospheric Discovery (LEAD) system, to design [...]
Microsoft are developing a Trident platform based upon Windows Workflow Foundation. They are collaborating with the myExperiment developers on the sharing of Taverna Workbench workflows and service descriptions.
The Virginia Bioinformatics Institute are developing a “pathogen portal” (PathPort) to combine information about pathogens with powerful analysis and visualization tools. The myExperiment team have collaborated with their development team to ensure interoperability with the Taverna Workbench. A demonstration of the interoperation was given at ISMB in 2006.

