<?xml version = "1.0" encoding = "UTF-8"?>
<serviceDescriptions  xmlns="pd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="pd /C:/Documents and Settings/ytanoh/My Documents/TAVERNA/taverna-1.4-old/plugins/pedro/services/model/common.xsd">
	<serviceDescription >
		<serviceName>mwfilter</serviceName>
		<organisation >
			<organisationName>European Bioinformatics Institute</organisationName>
			<organisationDescriptionText>http://www.ebi.ac.uk/</organisationDescriptionText>
			<organisationKey>EBI</organisationKey>
		</organisation>

		<locationURL>http://www.ebi.ac.uk/soaplab/emboss4/services/protein_composition.mwfilter</locationURL>
		<interfaceWSDL>http://www.ebi.ac.uk/soaplab/emboss4/services/protein_composition.mwfilter?wsdl</interfaceWSDL>
		<serviceDescriptionText>Filter noisy molecular weights from mass spectrometry output. Detailed info about this operation can be found at the following link:
http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/mwfilter.html</serviceDescriptionText>
		<operations >
			<serviceOperation >
				<operationName>mwfilter</operationName>
				<operationDescriptionText>Filter noisy molecular weights from mass spectrometry output. Detailed info about this operation can be found at the following link:
http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/mwfilter.html</operationDescriptionText>
				<operationInputs >
					<parameter >
						<parameterName>infile_direct_data</parameterName>
						<parameterDescription>Molecular weights. Parameter mandatory if the &apos;infile_usa&apos; parameter hasn&apos;t been chosen. Both parameters are mutually exclusisve. An example of input can be found here: http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/mwfilter.html#input.1</parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>infile_url</parameterName>
						<parameterDescription>URL of molecular weights. Parameter mandatory if the &apos;infile_direct_data&apos; parameter hasn&apos;t been chosen. Both parameters are mutually exclusisve.</parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>tolerance</parameterName>
						<parameterDescription>Type: float. Ppm tolerance. This is an optional parameter. The default is 50.0</parameterDescription>
						<defaultValue>50.0</defaultValue>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>datafile_direct_data</parameterName>
						<parameterDescription>Molecular weight standards data. This is an optional parameter. The parameters &apos;datafile_direct_data&apos; and &apos;datafile_url&apos; are mutually exclusive. </parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>datafile_url</parameterName>
						<parameterDescription>URL of molecular weight standards data. This is an optional parameter. The parameters &apos;datafile_direct_data&apos; and &apos;datafile_url&apos; are mutually exclusive. </parameterDescription>
						<defaultValue>Emwfilter.dat</defaultValue>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>showdel</parameterName>
						<parameterDescription>Type: boolean(true/false). Show deleted molecular weights. This is an optional parameter. The default is &apos;false&apos;. </parameterDescription>
						<defaultValue>false</defaultValue>
						<transportDataType>String</transportDataType>
					</parameter>

				</operationInputs>

				<operationOutputs >
					<parameter >
						<parameterName>report</parameterName>
						<parameterDescription>Type: string. A general report for the underlying analysis job.</parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>detailed_status</parameterName>
						<parameterDescription>Type: long. The exit code of the underlying analysis job, 0 means the job returned normally.</parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

					<parameter >
						<parameterName>outfile</parameterName>
						<parameterDescription>Returns a list of the molecular weights with the unwanted (noisy) data removed.</parameterDescription>
						<transportDataType>String</transportDataType>
					</parameter>

				</operationOutputs>

				<operationTask>http://www.mygrid.org.uk/ontology#filtering</operationTask>
			</serviceOperation>

		</operations>

		<serviceType>Soaplab service</serviceType>
	</serviceDescription>

</serviceDescriptions>
