psiphi European Bioinformatics Institute http://www.ebi.ac.uk/ EBI http://www.ebi.ac.uk/soaplab/emboss4/services/protein_3d_structure.psiphi http://www.ebi.ac.uk/soaplab/emboss4/services/protein_3d_structure.psiphi?wsdl Calculates the psi and phi torsion angles around the alpha carbons (CA) in (a specified stretch of) a specified chain of a protein structure from the co-ordinates of the main chain atoms in the two planes around it. Detailed info about this operation can be found at the following link: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss-4.1.0/html/emboss/apps/psiphi.html psiphi Calculates the psi and phi torsion angles around the alpha carbons (CA) in (a specified stretch of) a specified chain of a protein structure from the co-ordinates of the main chain atoms in the two planes around it. Detailed info about this operation can be found at the following link: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss-4.1.0/html/emboss/apps/psiphi.html infile_direct_data Type: string. Protein structure coordinates. Parameter mandatory if the infile_usa parameter hasn't been chosen. Both parameters are mutually exclusive. An example of input is here: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss-4.1.0/html/emboss/apps/psiphi.html#input.1 String infile_url Type: string. URL of protein structure coordinates. Parameter mandatory if the infile_direct_data parameter hasn't been chosen. Both parameters are mutually exclusive. String chainnumber Type: long. Number of the chain for which torsion angles should be calculated. This is an optional parameter. The default is 1. 1 String startresiduenumber Type: long. First residue in chain for which torsion angles should be calculated. This is an optional parameter. The default is 1. 1 String finishresiduenumber Type: long. Last residue in chain for which torsion angles should be calculated (1 = last residue). This is an optional parameter. The default is 1. 1 String report Type: string. A general report for the underlying analysis job. String detailed_status Type: long. The exit code of the underlying analysis job, 0 means the job returned normally. String outfile Returns Phi and psi torsion angles from protein coordinates. http://www.mygrid.org.uk/ontology#protein_structure String http://www.mygrid.org.uk/ontology#calculating Soaplab service