domainrep European Bioinformatics Institute http://www.ebi.ac.uk/ EBI http://www.ebi.ac.uk/soaplab/emboss4/services/protein_3d_structure.domainrep http://www.ebi.ac.uk/soaplab/emboss4/services/protein_3d_structure.domainrep?wsdl Reorder DCF file to identify representative structures. Detailed info about this operation can be found at the following link: http://liv.bmc.uu.se/cgi-bin/emboss/help/domainrep domainrep Reorder DCF file to identify representative structures. Detailed info about this operation can be found at the following link: http://liv.bmc.uu.se/cgi-bin/emboss/help/domainrep dcfinfile_direct_data Type: string. Specifies the DCF file (domain classification file) (input). A 'domain classification file' contains classification and other data for domains from SCOP or CATH, in DCF format (EMBL-like). The files are generated by using SCOPPARSE and CATHPARSE. Domain sequence information can be added to the file by using DOMAINSEQS. This is a mandatory parameter if the parameter 'dcfinfile_url' is not chosen. Both parameters are mutually exclusive. An example of input is available here: http://liv.bmc.uu.se/cgi-bin/emboss/help/domainrep#input.1 String dcfinfile_url Type: string. URL of DCF file (domain classification file) (input). A 'domain classification file' contains classification and other data for domains from SCOP or CATH, in DCF format (EMBL-like). The files are generated by using SCOPPARSE and CATHPARSE. Domain sequence information can be added to the file by using DOMAINSEQS. This is a mandatory parameter if the parameter 'dcfinfile_direct_data' is not chosen. Both parameters are mutually exclusive. String node Type: string. This option specifies the node for reordering the file. Reordering can be done for any specified node in the SCOP or CATH hierarchies. For example by selecting 'Class' entries belonging to the same Class will be reordered in turn. This is an optinal parameter. The allowed values for this parameter are: 1(Class (SCOP))| 2(Fold (SCOP))| 3(Superfamily (SCOP))| 4(Family (SCOP))| 5(Class (CATH))| 6(Architecture (CATH))| 7(Topology (CATH))| 8(Homologous Superfamily (CATH))| 9(Family (CATH))| The default is 1. 1 String report Type: string. A general report for the underlying analysis job. String detailed_status Type: long. The exit code of the underlying analysis job, 0 means the job returned normally. String dcfoutfile Returns a DCF file containing the same data except that the order of domains within each user-specified node (e.g. family) in the hierarchy may be changed so that the representative structure of each node is given first. http://www.mygrid.org.uk/ontology#protein_structure String http://www.mygrid.org.uk/ontology#filtering Soaplab service