fcontml European Bioinformatics Institute http://www.ebi.ac.uk/ EBI http://www.ebi.ac.uk/soaplab/emboss4/services/phylogeny_gene_frequencies.fcontml http://www.ebi.ac.uk/soaplab/emboss4/services/phylogeny_gene_frequencies.fcontml?wsdl Estimates phylogenies from gene frequency data by maximum likelihood under a model in which all divergence is due to genetic drift in the absence of new mutations. Detailed info about this operation can be found at the following link: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss/html/embassy/phylipnew/fcontml.html fcontml Estimates phylogenies from gene frequency data by maximum likelihood under a model in which all divergence is due to genetic drift in the absence of new mutations. Detailed info about this operation can be found at the following link: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss/html/embassy/phylipnew/fcontml.html infile_direct_data Type: string. File containing one or more sets of data. This is a mandatory parameter.'infile_direct_data'and'infile_url'are mutually exclusive. An example of data set can be found here: http://genome.jouy.inra.fr/doc/genome/suite-logicielle/emboss/html/embassy/phylipnew/fcontml.html#input.1 String infile_url Type: string. URL of file containing oneor more sets of data. This is a mandatory parameter if'infile_direct_data'parameter is not selected.'infile_direct_data'and'infile_url'are mutually exclusive. String intreefile_direct_data Type: string. Phylip tree file. This is an optional parameter. No default value available.'intreefile_direct_data'and'intreefile_url'are mutually exclusive. String intreefile_url Type: string. URL of Phylip tree file. This is an optional parameter. No default value available.'intreefile_direct_data'and'intreefile_url'are mutually exclusive. String datatype Type: string. Input type. This is an optional parameter. The allowed values for this parameter are: g(Gene frequencies) |i(Continuous characters). The default is'g'. g String lengths Type: boolean (Yes/No). Use branch lengths from user trees. This is an optional parameter. The default is'No'. false String njumble Type: long. Number of times to randomise. This is an optional parameter. The default is 0. 0 String seed Type: long. Random number seed between 1 and 32767 (must be odd). This is an optional parameter. The default is 1. 1 String global Type: boolean(Yes/No). Global rearrangements. This is an optional parameter. The default is'No'. false String outgrno Type: long. Species number to use as outgroup. This is an optional parameter. The default is 0. 0 String trout Type: boolean (Yes/No). Write out trees to tree file. This is an optional parameter. The default is'Yes'. Y String printdata Type: boolean (Yes/No). Print data at start of run. This is an optional parameter. The default is'No'. false String progress Type: boolean (Yes/No). Print indications of progress of run. This is an optional parameter. The default is'Yes'. true String treeprint Type: boolean (Yes/No). Print out tree. This is an optional parameter. The default is'Yes'. true String report Type: string. A general report for the underlying analysis job. String detailed_status Type: long. The exit code of the underlying analysis job, 0 means the job returned normally. String outfile Returns phylogenetic tree from gene frequency data by maximum likelihood http://www.mygrid.org.uk/ontology#phylogenetic_tree String outtreefile Returns phylogenetic tree file. String http://www.mygrid.org.uk/ontology#predicting Soaplab service